RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 SNURFLB1AK76 121 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 SPINK4O60575 86 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 IGLV2-8P01709 118 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 TYMSP04818 313 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 COX19Q49B96 90 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 ZNF575Q86XF7 245 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 GFRA4Q9GZZ7 299 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 NOP10Q9NPE3 64 aaKnown RBP10.26□□□□□ -0.77
CPSF1-206ENST00000531480 MDFICQ9P1T7 246 aa10.26□□□□□ -0.77
CPSF1-206ENST00000531480 PLECQ15149 4684 aaKnown RBP10.26□□□□□ -0.77
CPSF1-206ENST00000531480 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
CPSF1-206ENST00000531480 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
CPSF1-206ENST00000531480 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
CPSF1-206ENST00000531480 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
CPSF1-206ENST00000531480 LGALS9BQ3B8N2 356 aa10.25□□□□□ -0.77
CPSF1-206ENST00000531480 DNLZQ5SXM8 178 aa10.25□□□□□ -0.77
CPSF1-206ENST00000531480 RPP21Q9H633 154 aaKnown RBP10.25□□□□□ -0.77
CPSF1-206ENST00000531480 A0A1W2PPQ1 181 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 PGPEP1LA6NFU8 196 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 K7EN84 100 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 GNRH2O43555 120 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 SH2D1AO60880 128 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 S100A8P05109 93 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 DAD1P61803 113 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 NUDT10Q8NFP7 164 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 NUDT11Q96G61 164 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 SPXQ9BT56 116 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 IL36BQ9NZH7 164 aa10.24□□□□□ -0.77
CPSF1-206ENST00000531480 OR5I1Q13606 314 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 Q6ZTI0 123 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 NHLRC2Q8NBF2 726 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 TSKUQ8WUA8 353 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 RASL10AQ92737 203 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 C9orf85Q96MD7 179 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 NAT8BQ9UHF3 227 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 NAGKQ9UJ70 344 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 MUC4Q99102 2169 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 LYSTQ99698 3801 aa10.23□□□□□ -0.77
CPSF1-206ENST00000531480 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 ORM1P02763 201 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
CPSF1-206ENST00000531480 OR2D3Q8NGH3 330 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 PTH2Q96A98 100 aa10.22□□□□□ -0.77
CPSF1-206ENST00000531480 RNASE7Q9H1E1 156 aaKnown RBP10.22□□□□□ -0.77
CPSF1-206ENST00000531480 A0A1B0GW15 77 aa10.21□□□□□ -0.77
CPSF1-206ENST00000531480 F2Z2F3 143 aa10.21□□□□□ -0.77
CPSF1-206ENST00000531480 CXCL1P09341 107 aa10.21□□□□□ -0.77
CPSF1-206ENST00000531480 ATRAIDQ6UW56 229 aa10.21□□□□□ -0.77
CPSF1-206ENST00000531480 FAM210BQ96KR6 192 aa10.21□□□□□ -0.77
CPSF1-206ENST00000531480 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
CPSF1-206ENST00000531480 TRBV24-1A0A075B6N3 115 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 ATP5G1P05496 136 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 TCTAP57738 103 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 PIK3CD-AS1Q5SR53 167 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 TMEM88Q6PEY1 159 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 NDUFAF3Q9BU61 184 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 V9GYV3 84 aa10.2□□□□□ -0.78
CPSF1-206ENST00000531480 TRGV1A0A0A0MS02 117 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 GAGE12BA1L429 117 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 M0R2P5 195 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 GAGE7O76087 117 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-206ENST00000531480 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 NACAE9PAV3 2078 aa10.19□□□□□ -0.78
CPSF1-206ENST00000531480 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
CPSF1-206ENST00000531480 ASIPP42127 132 aa10.18□□□□□ -0.78
CPSF1-206ENST00000531480 RIGQ13278 110 aa10.18□□□□□ -0.78
CPSF1-206ENST00000531480 SMIM15Q7Z3B0 74 aa10.18□□□□□ -0.78
CPSF1-206ENST00000531480 MRPL16Q9NX20 251 aaKnown RBP10.18□□□□□ -0.78
CPSF1-206ENST00000531480 URGCP-MRPS24S4R325 110 aa10.18□□□□□ -0.78
CPSF1-206ENST00000531480 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
CPSF1-206ENST00000531480 ELOBQ15370 118 aa10.17□□□□□ -0.78
CPSF1-206ENST00000531480 CBLN2Q8IUK8 224 aa10.17□□□□□ -0.78
CPSF1-206ENST00000531480 APLNQ9ULZ1 77 aa10.17□□□□□ -0.78
CPSF1-206ENST00000531480 DNAH1Q9P2D7 4330 aa10.17□□□□□ -0.78
CPSF1-206ENST00000531480 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 LCE6AA0A183 80 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 SCO1O75880 301 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 MT-ND6P03923 174 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 HOXA5P20719 270 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 FAM3BP58499 235 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-206ENST00000531480 CACNG7P62955 275 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
CPSF1-206ENST00000531480 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-206ENST00000531480 TRGV2A0A075B6R0 118 aa10.15□□□□□ -0.78
CPSF1-206ENST00000531480 HIGD1CA8MV81 97 aa10.15□□□□□ -0.78
CPSF1-206ENST00000531480 IGLL5B9A064 214 aa10.15□□□□□ -0.78
CPSF1-206ENST00000531480 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms