RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CAMK2N1Q7Z7J9 78 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 BAGE3Q86Y29 109 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 BAGE2Q86Y30 109 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 TOMM5Q8N4H5 51 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 C20orf203Q8NBC4 194 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 NPBQ8NG41 125 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 CHCHD1Q96BP2 118 aaKnown RBP2.11□□□□□ -2.07
PTPRK-220ENST00000531466 B9D2Q9BPU9 175 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 SMIM7Q9BQ49 75 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 FGF23Q9GZV9 251 aaPredicted RBP2.11□□□□□ -2.07
PTPRK-220ENST00000531466 CXCL16Q9H2A7 254 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 SND1-IT1Q9HBX3 110 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 MANBALQ9NQG1 85 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 HIGD1BQ9P298 99 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 PHLDA3Q9Y5J5 127 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 MYOM1P52179 1685 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 TRPM2O94759 1503 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 NWD2Q9ULI1 1742 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 MYH8P13535 1937 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 LAMB1P07942 1786 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 RGPD4Q7Z3J3 1758 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 KIDINS220Q9ULH0 1771 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 CITO14578 2027 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 EIF2AK4Q9P2K8 1649 aaKnown RBP2.1□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-21A0A0B4J1V1 117 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-43A0A0B4J1X8 118 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 TRAV13-2A0A0B4J235 113 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV7-4-1A0A0J9YVY3 117 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 A6NN06 94 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 APCSP02743 223 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 C3orf79P0CE67 100 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 SLC25A16P16260 332 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 PEBP1P30086 187 aaKnown RBP2.1□□□□□ -2.07
PTPRK-220ENST00000531466 ESRGQ1W209 222 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 LYPD2Q6UXB3 125 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 TMEM256Q8N2U0 113 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 RPRMLQ8N4K4 120 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 PFN4Q8NHR9 129 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 ODF3Q96PU9 254 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 CHCHD7Q9BUK0 85 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 TIMM21Q9BVV7 248 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 DEC1Q9P2X7 70 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 TRAPPC1Q9Y5R8 145 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 RGPD1P0DJD0 1748 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 IFT172Q9UG01 1749 aa2.1□□□□□ -2.07
PTPRK-220ENST00000531466 ATP7AQ04656 1500 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 TRBV6-7A0A0A0MS04 114 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 TRBV6-6A0A0A6YYG2 114 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-66A0A0C4DH42 116 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 A0A1W2PQD3 144 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 TCRBV4S1A1TA0A5B7 111 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 A6NIN4 97 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV1-69P01742 117 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-30-3P0DP02 117 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
PTPRK-220ENST00000531466 TSPEAR-AS2P59090 65 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 ZNF117Q03924 483 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 MIAQ16674 131 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 TMEM141Q96I45 108 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 NABP2Q9BQ15 211 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 SLC50A1Q9BRV3 221 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 CYP4F30PQ9H0H9 118 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 C11orf1Q9H5F2 150 aa2.09□□□□□ -2.07
PTPRK-220ENST00000531466 KIF26AQ9ULI4 1882 aaPredicted RBP2.09□□□□□ -2.08
PTPRK-220ENST00000531466 ALPK3Q96L96 1907 aa2.09□□□□□ -2.08
PTPRK-220ENST00000531466 CLTCQ00610 1675 aaKnown RBP2.09□□□□□ -2.08
PTPRK-220ENST00000531466 ROBO1Q9Y6N7 1651 aa2.09□□□□□ -2.08
PTPRK-220ENST00000531466 ARHGAP21Q5T5U3 1957 aa2.09□□□□□ -2.08
PTPRK-220ENST00000531466 TET2Q6N021 2002 aaPredicted RBP2.08□□□□□ -2.08
PTPRK-220ENST00000531466 MRC1P22897 1456 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 PTPRMP28827 1452 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 RGPD8O14715 1765 aaPredicted RBP2.08□□□□□ -2.08
PTPRK-220ENST00000531466 RGPD5Q99666 1765 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 AGLP35573 1532 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 GPATCH8Q9UKJ3 1502 aaKnown RBP2.08□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV3-49A0A0A0MS15 119 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 TRBV10-3A0A0K0K1G6 114 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 hDV103S1A0JD37 113 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 C17orf51A8MQB3 221 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 FXYD1O00168 92 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 BPY2O14599 106 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 IGLV3-19P01714 112 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 IL4P05112 153 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 GCHFRP30047 84 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 EFNA4P52798 201 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 KLKP1Q107X0 134 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 MOBPQ13875 183 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 C16orf47Q6ZP98 133 aaPredicted RBP2.08□□□□□ -2.08
PTPRK-220ENST00000531466 C2orf91Q6ZV80 131 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 ZFAND2AQ8N6M9 145 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 CYB561D1Q8N8Q1 229 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 CNEP1R1Q8N9A8 125 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 C8orf17Q9NRJ1 99 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 CLTCL1P53675 1640 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 CICQ96RK0 1608 aaPredicted RBP2.08□□□□□ -2.08
PTPRK-220ENST00000531466 DOCK6Q96HP0 2047 aa2.08□□□□□ -2.08
PTPRK-220ENST00000531466 PIKFYVEQ9Y2I7 2098 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms