RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 SCN10AQ9Y5Y9 1956 aa11.42□□□□□ -0.58
LRRK1-207ENST00000531270 ABCA1O95477 2261 aa11.41□□□□□ -0.58
LRRK1-207ENST00000531270 A0A0B4J2C4 111 aa11.41□□□□□ -0.58
LRRK1-207ENST00000531270 RBBP6Q7Z6E9 1792 aaKnown RBP11.41□□□□□ -0.58
LRRK1-207ENST00000531270 HEATR1Q9H583 2144 aaKnown RBP11.41□□□□□ -0.58
LRRK1-207ENST00000531270 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
LRRK1-207ENST00000531270 SIVA1O15304 175 aa11.41□□□□□ -0.58
LRRK1-207ENST00000531270 WISP1O95388 367 aa11.41□□□□□ -0.58
LRRK1-207ENST00000531270 CTSZQ9UBR2 303 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.58
LRRK1-207ENST00000531270 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 H0YGX0 51 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 LECT2O14960 151 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 ZNF747Q9BV97 191 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 LOC285556D6RIA3 1793 aa11.4□□□□□ -0.58
LRRK1-207ENST00000531270 PLXNA1Q9UIW2 1896 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 SPAG11BQ08648 103 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 PROK2Q9HC23 129 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 BRCA1P38398 1863 aaKnown RBP11.39□□□□□ -0.59
LRRK1-207ENST00000531270 A4D1N5 150 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 RPL39P62891 51 aaKnown RBP11.39□□□□□ -0.59
LRRK1-207ENST00000531270 SPTSSBQ8NFR3 76 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 KIAA2026Q5HYC2 2103 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 DIRC1Q969H9 104 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 NCOR1P1Q9H4R4 102 aa11.39□□□□□ -0.59
LRRK1-207ENST00000531270 TP53BP1Q12888 1972 aaPredicted RBP11.39□□□□□ -0.59
LRRK1-207ENST00000531270 SPTBN2O15020 2390 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 CRIPAKQ8N1N5 446 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 IGLV1-44P01699 117 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
LRRK1-207ENST00000531270 SPRNQ5BIV9 151 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 MSRB1Q9NZV6 116 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 COL6A6A6NMZ7 2263 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 RITA1Q96K30 269 aa11.38□□□□□ -0.59
LRRK1-207ENST00000531270 CLEC2BQ92478 149 aa11.37□□□□□ -0.59
LRRK1-207ENST00000531270 MED12Q93074 2177 aa11.37□□□□□ -0.59
LRRK1-207ENST00000531270 FHL1Q13642 323 aa11.37□□□□□ -0.59
LRRK1-207ENST00000531270 Q8N1Y9 231 aa11.37□□□□□ -0.59
LRRK1-207ENST00000531270 SMAD5-AS1Q9Y6J3 95 aa11.37□□□□□ -0.59
LRRK1-207ENST00000531270 FAM110AQ9BQ89 295 aa11.36□□□□□ -0.59
LRRK1-207ENST00000531270 TET1Q8NFU7 2136 aa11.36□□□□□ -0.59
LRRK1-207ENST00000531270 CACNA1BQ00975 2339 aa11.36□□□□□ -0.59
LRRK1-207ENST00000531270 TRBV12-3P01733 135 aa11.36□□□□□ -0.59
LRRK1-207ENST00000531270 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
LRRK1-207ENST00000531270 IGKV2D-26A0A0A0MRZ7 120 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 FGF23Q9GZV9 251 aaPredicted RBP11.35□□□□□ -0.59
LRRK1-207ENST00000531270 IGHV7-81A0A0B4J1V7 117 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 DOCK3Q8IZD9 2030 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 ANKRD39Q53RE8 183 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
LRRK1-207ENST00000531270 DEFB1P60022 68 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 BRK1Q8WUW1 75 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 ATOX1O00244 68 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 LY6G6EA0A0G2JKS1 128 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 U3KQA8 63 aa11.34□□□□□ -0.59
LRRK1-207ENST00000531270 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
LRRK1-207ENST00000531270 TEX22C9J3V5 150 aa11.33□□□□□ -0.6
LRRK1-207ENST00000531270 LGALS9O00182 355 aa11.33□□□□□ -0.6
LRRK1-207ENST00000531270 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
LRRK1-207ENST00000531270 GVINP1Q7Z2Y8 2422 aa11.32□□□□□ -0.6
LRRK1-207ENST00000531270 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
LRRK1-207ENST00000531270 CTSGP08311 255 aa11.32□□□□□ -0.6
LRRK1-207ENST00000531270 GBF1Q92538 1859 aa11.32□□□□□ -0.6
LRRK1-207ENST00000531270 LENEPQ9Y5L5 61 aa11.32□□□□□ -0.6
LRRK1-207ENST00000531270 CRYGBP07316 175 aa11.32□□□□□ -0.6
LRRK1-207ENST00000531270 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 C16orf54Q6UWD8 224 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 PHF3Q92576 2039 aaKnown RBP11.31□□□□□ -0.6
LRRK1-207ENST00000531270 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 COX7BP24311 80 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 C1orf147Q96MC9 270 aaPredicted RBP11.31□□□□□ -0.6
LRRK1-207ENST00000531270 TTTY13Q9BZ97 58 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 USF3Q68DE3 2245 aa11.31□□□□□ -0.6
LRRK1-207ENST00000531270 NRXN2Q9P2S2 1712 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 SPANXCQ9NY87 97 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 A0A087WZ39 114 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 H3BQ85 93 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
LRRK1-207ENST00000531270 I3L2K1 104 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 IGKV1-17P01599 117 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 MPLKIPQ8TAP9 179 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 TRBV10-2A0A0K0K1G8 114 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 C11orf45Q8TAV5 145 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 JMJD7-PLA2G4BH0Y9G9 81 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 SCN5AQ14524 2016 aa11.29□□□□□ -0.6
LRRK1-207ENST00000531270 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms