RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 TMEM208Q9BTX3 173 aa7.9□□□□□ -1.14
CAPN1-221ENST00000531068 A0A1B0GW15 77 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 A0A1B0GXF2 115 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 GZMBP10144 247 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 EMP1P54849 157 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 PKIAP61925 76 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 IQCJQ1A5X6 159 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 C12orf74Q32Q52 190 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 IGFL4Q6B9Z1 124 aa7.89□□□□□ -1.15
CAPN1-221ENST00000531068 RPP21Q9H633 154 aaKnown RBP7.89□□□□□ -1.15
CAPN1-221ENST00000531068 SACSQ9NZJ4 4579 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 INSP01308 110 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 P01737 135 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 HIST1H1AQ02539 215 aaPredicted RBP7.88□□□□□ -1.15
CAPN1-221ENST00000531068 Q6AWC8 147 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 AMTNQ6UX39 209 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 Q86TA4 180 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 C1orf158Q8N1D5 194 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 GATD1Q8NB37 220 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 OR8A1Q8NGG7 326 aa7.88□□□□□ -1.15
CAPN1-221ENST00000531068 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
CAPN1-221ENST00000531068 DEFB131BA0A096LNP1 70 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 APCSP02743 223 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 CSN1S1P47710 185 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 RAB4BP61018 213 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 PDZD11Q5EBL8 140 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 AAMDCQ9H7C9 122 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 APLNQ9ULZ1 77 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 CELA1Q9UNI1 258 aa7.87□□□□□ -1.15
CAPN1-221ENST00000531068 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 TRAV8-1A0A0A6YYK1 113 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 RBAKDNA6NC62 111 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 HIGD1CA8MV81 97 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 TSPOP30536 169 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 FAM222AQ5U5X8 452 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 GOLT1AQ6ZVE7 132 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 OR10J6PQ8NGY7 276 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 DKK2Q9UBU2 259 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 TP53TG3Q9ULZ0 132 aa7.86□□□□□ -1.15
CAPN1-221ENST00000531068 LINC00587B1AMM8 73 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 M0R2Z0 102 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 GPX1P07203 203 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 RAB4AP20338 218 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 HBBP68871 147 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 C9orf47Q6ZRZ4 202 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 NHLRC2Q8NBF2 726 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 FAM19A4Q96LR4 140 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 LINC01587Q99440 93 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 VGLL1Q99990 258 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 NDUFAF3Q9BU61 184 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 AGPAT4-IT1Q9H0P7 198 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
CAPN1-221ENST00000531068 DNAH1Q9P2D7 4330 aa7.84□□□□□ -1.15
CAPN1-221ENST00000531068 IGKV2-40A0A087WW87 121 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-221ENST00000531068 CRXO43186 299 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-221ENST00000531068 IGKV2D-40P01614 121 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-221ENST00000531068 PRB4P10163 310 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-221ENST00000531068 CDKN1BP46527 198 aa7.84□□□□□ -1.15
CAPN1-221ENST00000531068 LINC00310P59036 64 aa7.84□□□□□ -1.15
CAPN1-221ENST00000531068 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.15
CAPN1-221ENST00000531068 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.15
CAPN1-221ENST00000531068 TRAV12-2A0A075B6T6 113 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 LYRM9A8MSI8 78 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 SERF1AO75920 110 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 P0DMU3 169 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 CRIP1P50238 77 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 DAD1P61803 113 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 PLECQ15149 4684 aaKnown RBP7.83□□□□□ -1.16
CAPN1-221ENST00000531068 LBHQ53QV2 105 aaPredicted RBP7.83□□□□□ -1.16
CAPN1-221ENST00000531068 MRPL54Q6P161 138 aaKnown RBP7.83□□□□□ -1.16
CAPN1-221ENST00000531068 ZNF575Q86XF7 245 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 KCNS1Q96KK3 526 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 SGK494Q96LW2 274 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 C20orf144Q9BQM9 153 aa7.83□□□□□ -1.16
CAPN1-221ENST00000531068 ALKBH7Q9BT30 221 aaPredicted RBP7.83□□□□□ -1.16
CAPN1-221ENST00000531068 NUPR1O60356 82 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 CT45A10P0DMU9 189 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 PMCHP20382 165 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 TCL1AP56279 114 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 ERCC8Q13216 396 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 RIGQ13278 110 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 PRNTQ86SH4 94 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 MRPL52Q86TS9 123 aaKnown RBP7.82□□□□□ -1.16
CAPN1-221ENST00000531068 GTSF1Q8WW33 167 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 NAGKQ9UJ70 344 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 AGRNO00468 2067 aa7.82□□□□□ -1.16
CAPN1-221ENST00000531068 TRBV7-9A0A0J9YWB2 115 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 A0A1B0GUT8 65 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms