RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SFRP2Q96HF1 295 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 C18orf15Q96N68 181 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
SF3B2-211ENST00000531041 GAGE12BA1L429 117 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 GAGE7O76087 117 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 OR5AL1P0C617 328 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 GAGE12FP0CL80 117 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 GAGE12GP0CL81 117 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 GAGE12IP0CL82 117 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 CT83Q5H943 113 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 Q6ZTC4 211 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 C15orf54Q8N8G6 183 aa12.02□□□□□ -0.49
SF3B2-211ENST00000531041 MRPL16Q9NX20 251 aaKnown RBP12.02□□□□□ -0.49
SF3B2-211ENST00000531041 A8MWL6 223 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 SNAI2O43623 268 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 IGLC6P0CF74 106 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 GZMBP10144 247 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 PIK3CD-AS1Q5SR53 167 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 NDUFAF3Q9BU61 184 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 PHLDA3Q9Y5J5 127 aa12.01□□□□□ -0.49
SF3B2-211ENST00000531041 ZNF876PQ49A33 203 aa12□□□□□ -0.49
SF3B2-211ENST00000531041 C10orf91Q5T1B1 145 aa12□□□□□ -0.49
SF3B2-211ENST00000531041 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
SF3B2-211ENST00000531041 MUC7Q8TAX7 377 aa12□□□□□ -0.49
SF3B2-211ENST00000531041 V9GYV3 84 aa12□□□□□ -0.49
SF3B2-211ENST00000531041 TRGV2A0A075B6R0 118 aa11.99□□□□□ -0.49
SF3B2-211ENST00000531041 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
SF3B2-211ENST00000531041 FER1L6-AS1Q8NA97 138 aa11.99□□□□□ -0.49
SF3B2-211ENST00000531041 F2Z2F3 143 aa11.98□□□□□ -0.49
SF3B2-211ENST00000531041 ATP5G1P05496 136 aa11.98□□□□□ -0.49
SF3B2-211ENST00000531041 SYT8Q8NBV8 401 aa11.98□□□□□ -0.49
SF3B2-211ENST00000531041 PHLDA1Q8WV24 401 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-211ENST00000531041 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
SF3B2-211ENST00000531041 TRAV10A0A0B4J240 114 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 NDUFA5Q16718 116 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 ZFP82Q8N141 532 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 TSKUQ8WUA8 353 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
SF3B2-211ENST00000531041 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
SF3B2-211ENST00000531041 NXPH4O95158 308 aa11.96□□□□□ -0.49
SF3B2-211ENST00000531041 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
SF3B2-211ENST00000531041 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
SF3B2-211ENST00000531041 OR10AG1Q8NH19 301 aa11.96□□□□□ -0.49
SF3B2-211ENST00000531041 GTSF1Q8WW33 167 aa11.96□□□□□ -0.49
SF3B2-211ENST00000531041 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 TRAV4A0A0B4J268 109 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 M0R381 172 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 PPP1R2P9O14990 202 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 CTRLP40313 264 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 LYZL1Q6UWQ5 148 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 POM121L12Q8N7R1 296 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 TPPP3Q9BW30 176 aa11.95□□□□□ -0.5
SF3B2-211ENST00000531041 A8MWV9 139 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 RNF212Q495C1 297 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 WDR73Q6P4I2 378 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 ANAPC16Q96DE5 110 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 CNFNQ9BYD5 112 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 IGHV4-4A0A075B6R2 117 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 RS1O15537 224 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 MT-ND4LP03901 98 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 HTN3P15516 51 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 CACNG7P62955 275 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 CEMP1Q6PRD7 247 aaPredicted RBP11.94□□□□□ -0.5
SF3B2-211ENST00000531041 OR4C5Q8NGB2 326 aa11.94□□□□□ -0.5
SF3B2-211ENST00000531041 MUC21A0A0G2JKD1 596 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 MUC21A0A140T8X8 626 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 SMIM27A0A1W2PRY6 76 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 HIGD1CA8MV81 97 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 C3orf84H3BNL1 204 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 CIDEAO60543 219 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 ZNF479Q96JC4 524 aa11.93□□□□□ -0.5
SF3B2-211ENST00000531041 F5H768 121 aa11.92□□□□□ -0.5
SF3B2-211ENST00000531041 IGHV3-53P01767 116 aa11.92□□□□□ -0.5
SF3B2-211ENST00000531041 HOXA5P20719 270 aa11.92□□□□□ -0.5
SF3B2-211ENST00000531041 JPT2Q9H910 190 aa11.92□□□□□ -0.5
SF3B2-211ENST00000531041 NTF3P20783 257 aa11.91□□□□□ -0.5
SF3B2-211ENST00000531041 SSTP61278 116 aa11.91□□□□□ -0.5
SF3B2-211ENST00000531041 FHL2Q14192 279 aa11.91□□□□□ -0.5
SF3B2-211ENST00000531041 ZFAND6Q6FIF0 208 aa11.91□□□□□ -0.5
SF3B2-211ENST00000531041 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
SF3B2-211ENST00000531041 ZFP2Q6ZN57 461 aa11.9□□□□□ -0.5
SF3B2-211ENST00000531041 NUP35Q8NFH5 326 aa11.9□□□□□ -0.5
SF3B2-211ENST00000531041 FAM210BQ96KR6 192 aa11.9□□□□□ -0.5
SF3B2-211ENST00000531041 NAT8BQ9UHF3 227 aa11.9□□□□□ -0.5
SF3B2-211ENST00000531041 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-211ENST00000531041 TRGV4A0A0C4DH28 118 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 APOC3P02656 99 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 CRYGDP07320 174 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 SLAQ13239 276 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 CASC10Q5T4H9 136 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 CLRN3Q8NCR9 226 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms