RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 KTN1Q86UP2 1357 aaKnown RBP1.78□□□□□ -2.12
C11orf88-204ENST00000529661 J3QKU1 62 aa1.78□□□□□ -2.12
C11orf88-204ENST00000529661 COA5Q86WW8 74 aa1.78□□□□□ -2.12
C11orf88-204ENST00000529661 ACBD7Q8N6N7 88 aa1.78□□□□□ -2.12
C11orf88-204ENST00000529661 INTS1Q8N201 2190 aaKnown RBP1.78□□□□□ -2.13
C11orf88-204ENST00000529661 ZGRF1Q86YA3 2104 aa1.78□□□□□ -2.13
C11orf88-204ENST00000529661 CASP8AP2Q9UKL3 1982 aa1.78□□□□□ -2.13
C11orf88-204ENST00000529661 DOCK1Q14185 1865 aa1.77□□□□□ -2.13
C11orf88-204ENST00000529661 A0A1W2PRS3 328 aa1.77□□□□□ -2.13
C11orf88-204ENST00000529661 MCRIP1C9JLW8 97 aa1.77□□□□□ -2.13
C11orf88-204ENST00000529661 F8W1H4 67 aa1.77□□□□□ -2.13
C11orf88-204ENST00000529661 KLF7O75840 302 aaPredicted RBP1.77□□□□□ -2.13
C11orf88-204ENST00000529661 FAM74A1Q5RGS3 127 aa1.77□□□□□ -2.13
C11orf88-204ENST00000529661 Q6ZRN7 208 aaPredicted RBP1.77□□□□□ -2.13
C11orf88-204ENST00000529661 C8orf59Q8N0T1 100 aaPredicted RBP1.77□□□□□ -2.13
C11orf88-204ENST00000529661 PPDPFLQ8WWR9 84 aa1.77□□□□□ -2.13
C11orf88-204ENST00000529661 MUC22E2RYF6 1773 aaPredicted RBP1.77□□□□□ -2.13
C11orf88-204ENST00000529661 TRAV30A0A087WSZ9 112 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 TRBV6-4A0A1B0GX49 114 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 APOC4-APOC2K7ER74 178 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 GEMIN2O14893 280 aaKnown RBP1.76□□□□□ -2.13
C11orf88-204ENST00000529661 NDUFB6O95139 128 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 APOC2P02655 101 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 RHOHQ15669 191 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 SPANXN1Q5VSR9 72 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
C11orf88-204ENST00000529661 Q6ZS92 163 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 C3orf62Q6ZUJ4 267 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 GTF2H5Q6ZYL4 71 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 PLPP5Q8NEB5 264 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 LSM10Q969L4 123 aaKnown RBP1.76□□□□□ -2.13
C11orf88-204ENST00000529661 SPTSSAQ969W0 71 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 MRPL57Q9BQC6 102 aaKnown RBP1.76□□□□□ -2.13
C11orf88-204ENST00000529661 TMEM242Q9NWH2 141 aa1.76□□□□□ -2.13
C11orf88-204ENST00000529661 ZNF142P52746 1687 aaPredicted RBP1.76□□□□□ -2.13
C11orf88-204ENST00000529661 KIAA0100Q14667 2235 aaKnown RBP1.75□□□□□ -2.13
C11orf88-204ENST00000529661 ANKRD26Q9UPS8 1709 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 A0A0J9YY99 117 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 TRBV6-5A0A0K0K1A5 114 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 H3BRM9 83 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 CCL25O15444 150 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 NUPR1O60356 82 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 IFNA17P01571 189 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 IL5P05113 134 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 PIPP12273 146 aaPredicted RBP1.75□□□□□ -2.13
C11orf88-204ENST00000529661 HSD52Q0P140 79 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 CATR1Q13166 79 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 C12orf73Q69YU5 71 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 LINC00299Q6ZSB3 139 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 LINC00526Q96FQ7 95 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 KLK9Q9UKQ9 250 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 TCHHQ07283 1943 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 TTC37Q6PGP7 1564 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 PATJQ8NI35 1801 aa1.75□□□□□ -2.13
C11orf88-204ENST00000529661 ZNF609O15014 1411 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 DAPK1P53355 1430 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 ADGRB2O60241 1585 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 PIRTP0C851 137 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 POLR2JP52435 117 aaKnown RBP1.74□□□□□ -2.13
C11orf88-204ENST00000529661 REG4Q9BYZ8 158 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 PTPRMP28827 1452 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 SPHKAPQ2M3C7 1700 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 ROBO1Q9Y6N7 1651 aa1.74□□□□□ -2.13
C11orf88-204ENST00000529661 TMEM30CPA0ZSE6 113 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 MRPS14O60783 128 aaKnown RBP1.73□□□□□ -2.13
C11orf88-204ENST00000529661 C9orf153Q5TBE3 101 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 CDC42SE1Q9NRR8 79 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 MED9Q9NWA0 146 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 NDUFA12Q9UI09 145 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 ABCA3Q99758 1704 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 NWD2Q9ULI1 1742 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 PARP14Q460N5 1801 aa1.73□□□□□ -2.13
C11orf88-204ENST00000529661 SNRNP200O75643 2136 aaKnown RBP1.72□□□□□ -2.13
C11orf88-204ENST00000529661 PLXNA1Q9UIW2 1896 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 CTTNBP2Q8WZ74 1663 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 CXorf51AA0A1B0GTR3 108 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 M0R143 59 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 M0R2N4 97 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 INE1O15225 51 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 GYPBP06028 91 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 MPV17LQ2QL34 196 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 NDUFA11Q86Y39 141 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 TMEM141Q96I45 108 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 KDM6BO15054 1643 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 RBBP6Q7Z6E9 1792 aaKnown RBP1.72□□□□□ -2.13
C11orf88-204ENST00000529661 RB1CC1Q8TDY2 1594 aa1.72□□□□□ -2.13
C11orf88-204ENST00000529661 PHIPQ8WWQ0 1821 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 DOCK2Q92608 1830 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 TRAV17A0A0B4J275 112 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 SNCGO76070 127 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 IFITM1P13164 125 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 NPC2P61916 151 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 PKIAP61925 76 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 UNQ5815/PRO19632Q6UWF5 114 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 LYPD5Q6UWN5 251 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 SVBPQ8N300 66 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms