RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 ELOBQ15370 118 aa7.6□□□□□ -1.19
CMTM1-211ENST00000528484 LRRC37A5PQ49AS3 106 aa7.6□□□□□ -1.19
CMTM1-211ENST00000528484 GAGE13Q4V321 117 aa7.6□□□□□ -1.19
CMTM1-211ENST00000528484 PQLC2Q6ZP29 291 aa7.6□□□□□ -1.19
CMTM1-211ENST00000528484 CIRBP-AS1Q8TBR5 109 aa7.6□□□□□ -1.19
CMTM1-211ENST00000528484 SDHCQ99643 169 aaPredicted RBP7.6□□□□□ -1.19
CMTM1-211ENST00000528484 A0A087WX48 190 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 FAM240BA0A1B0GVZ2 78 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 S100A4P26447 101 aaKnown RBP7.59□□□□□ -1.19
CMTM1-211ENST00000528484 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
CMTM1-211ENST00000528484 CYCSP99999 105 aaKnown RBP7.59□□□□□ -1.19
CMTM1-211ENST00000528484 ZNF506Q5JVG8 444 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 OR10G9Q8NGN4 311 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 PTH2Q96A98 100 aa7.59□□□□□ -1.19
CMTM1-211ENST00000528484 RNF222A6NCQ9 220 aa7.58□□□□□ -1.2
CMTM1-211ENST00000528484 PLA2G10O15496 165 aa7.58□□□□□ -1.2
CMTM1-211ENST00000528484 GCGP01275 180 aa7.58□□□□□ -1.2
CMTM1-211ENST00000528484 LGALSLQ3ZCW2 172 aaPredicted RBP7.58□□□□□ -1.2
CMTM1-211ENST00000528484 DPPA3Q6W0C5 159 aa7.58□□□□□ -1.2
CMTM1-211ENST00000528484 Q8N3U1 123 aa7.58□□□□□ -1.2
CMTM1-211ENST00000528484 OR5AC2Q9NZP5 309 aa7.58□□□□□ -1.2
CMTM1-211ENST00000528484 PGPEP1LA6NFU8 196 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 IGLV2-11P01706 119 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 PET100P0DJ07 73 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 Q0VG73 95 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 SMUG1Q53HV7 270 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 MZT2BQ6NZ67 158 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 UBE2WQ96B02 151 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 C9orf85Q96MD7 179 aa7.57□□□□□ -1.2
CMTM1-211ENST00000528484 GNG5P63218 68 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 OR2T35Q8NGX2 323 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 TVP23CQ96ET8 276 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 SGK494Q96LW2 274 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 C1orf43Q9BWL3 253 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 RBM38Q9H0Z9 239 aaKnown RBP7.56□□□□□ -1.2
CMTM1-211ENST00000528484 PARLQ9H300 379 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 KLK12Q9UKR0 248 aa7.56□□□□□ -1.2
CMTM1-211ENST00000528484 RHODO00212 210 aa7.55□□□□□ -1.2
CMTM1-211ENST00000528484 CRPP02741 224 aa7.55□□□□□ -1.2
CMTM1-211ENST00000528484 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-211ENST00000528484 NIT1Q86X76 327 aa7.55□□□□□ -1.2
CMTM1-211ENST00000528484 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
CMTM1-211ENST00000528484 CCDC32Q9BV29 185 aa7.55□□□□□ -1.2
CMTM1-211ENST00000528484 SIX6O95475 246 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 TCRAP04437 139 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 LINC00694P0DN24 101 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 RNASE3P12724 160 aaKnown RBP7.54□□□□□ -1.2
CMTM1-211ENST00000528484 ASIPP42127 132 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 SAPCD1Q5SSQ6 148 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 PRNTQ86SH4 94 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 TMEM75Q8N9X5 138 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 OR2G3Q8NGZ4 309 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 SMIM3Q9BZL3 60 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 HSPB11Q9Y547 144 aa7.54□□□□□ -1.2
CMTM1-211ENST00000528484 A6NJY4 79 aa7.53□□□□□ -1.2
CMTM1-211ENST00000528484 TMEM262E9PQX1 116 aa7.53□□□□□ -1.2
CMTM1-211ENST00000528484 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
CMTM1-211ENST00000528484 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-211ENST00000528484 FLI1Q01543 452 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-211ENST00000528484 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-211ENST00000528484 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
CMTM1-211ENST00000528484 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 H0YIZ8 118 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
CMTM1-211ENST00000528484 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 RPL12P30050 165 aaKnown RBP7.52□□□□□ -1.21
CMTM1-211ENST00000528484 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
CMTM1-211ENST00000528484 FAM74A4Q5TZK3 123 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 C14orf178Q8N769 122 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-211ENST00000528484 OR10G7Q8NGN6 311 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 PPP1R1CQ8WVI7 109 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
CMTM1-211ENST00000528484 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
CMTM1-211ENST00000528484 A0A0D9SG52 128 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 CDC34P49427 236 aaPredicted RBP7.51□□□□□ -1.21
CMTM1-211ENST00000528484 RAB2AP61019 212 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 PKIAP61925 76 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 HSD17B11Q8NBQ5 300 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 OR11H4Q8NGC9 324 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 ZC2HC1AQ96GY0 325 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 IL36BQ9NZH7 164 aa7.51□□□□□ -1.21
CMTM1-211ENST00000528484 LRP2P98164 4655 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 B4DEV8 164 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 SUMO1P63165 101 aaKnown RBP7.5□□□□□ -1.21
CMTM1-211ENST00000528484 ATRAIDQ6UW56 229 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 TMEM167BQ9NRX6 74 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 EPDR1Q9UM22 224 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
CMTM1-211ENST00000528484 H3BVH4 76 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms