RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CXorf1O96002 111 aa17.29■□□□□ 0.36
TRIM3-206ENST00000528227 Q9HAA7 133 aa17.29■□□□□ 0.36
TRIM3-206ENST00000528227 TMEM167BQ9NRX6 74 aa17.29■□□□□ 0.36
TRIM3-206ENST00000528227 IGHV3-30P01768 117 aa17.28■□□□□ 0.36
TRIM3-206ENST00000528227 IGHV3-33P01772 117 aa17.28■□□□□ 0.36
TRIM3-206ENST00000528227 SMR3BP02814 79 aaPredicted RBP17.28■□□□□ 0.36
TRIM3-206ENST00000528227 IGHV3-30-3P0DP02 117 aa17.28■□□□□ 0.36
TRIM3-206ENST00000528227 IGHV3-30-5P0DP03 117 aa17.28■□□□□ 0.36
TRIM3-206ENST00000528227 MGST1P10620 155 aaKnown RBP17.28■□□□□ 0.36
TRIM3-206ENST00000528227 GTSF1LQ9H1H1 148 aa17.28■□□□□ 0.36
TRIM3-206ENST00000528227 SH3BGRL3Q9H299 93 aa17.28■□□□□ 0.36
TRIM3-206ENST00000528227 SAPCD1Q5SSQ6 148 aa17.27■□□□□ 0.36
TRIM3-206ENST00000528227 Q8N814 137 aa17.27■□□□□ 0.36
TRIM3-206ENST00000528227 ATP6V0E2Q8NHE4 81 aa17.27■□□□□ 0.36
TRIM3-206ENST00000528227 ACTR3CQ9C0K3 210 aaPredicted RBP17.27■□□□□ 0.36
TRIM3-206ENST00000528227 TNFSF18Q9UNG2 199 aa17.27■□□□□ 0.36
TRIM3-206ENST00000528227 VPS13BQ7Z7G8 4022 aa17.26■□□□□ 0.35
TRIM3-206ENST00000528227 HAMPP81172 84 aa17.25■□□□□ 0.35
TRIM3-206ENST00000528227 TMEM70Q9BUB7 260 aa17.25■□□□□ 0.35
TRIM3-206ENST00000528227 HERC1Q15751 4861 aa17.25■□□□□ 0.35
TRIM3-206ENST00000528227 IGKV3D-20A0A0C4DH25 116 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 A0A1W2PRE2 83 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 LAGE3Q14657 143 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 Q6ZSN1 163 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 LINC00479Q96M42 142 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 MED28Q9H204 178 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 PARLQ9H300 379 aa17.24■□□□□ 0.35
TRIM3-206ENST00000528227 Q5BKY6 102 aa17.23■□□□□ 0.35
TRIM3-206ENST00000528227 ZFP2Q6ZN57 461 aa17.23■□□□□ 0.35
TRIM3-206ENST00000528227 TRAV34A0A0B4J273 112 aa17.22■□□□□ 0.35
TRIM3-206ENST00000528227 LINC00694P0DN24 101 aa17.22■□□□□ 0.35
TRIM3-206ENST00000528227 PIK3CD-AS1Q5SR53 167 aa17.22■□□□□ 0.35
TRIM3-206ENST00000528227 A8MWV9 139 aa17.21■□□□□ 0.35
TRIM3-206ENST00000528227 Q8N3U1 123 aa17.21■□□□□ 0.35
TRIM3-206ENST00000528227 ARL2-SNX15V9GYD0 113 aa17.21■□□□□ 0.35
TRIM3-206ENST00000528227 S100A4P26447 101 aaKnown RBP17.2■□□□□ 0.34
TRIM3-206ENST00000528227 ZNF726P1Q15940 193 aa17.2■□□□□ 0.34
TRIM3-206ENST00000528227 GAGE12JA6NER3 117 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 FABP5P3A8MUU1 101 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 FAM229AH3BQW9 127 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 PTTG1O95997 202 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 ASIPP42127 132 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 GAGE1Q13065 139 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 GAGE4Q13068 117 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 GAGE5Q13069 117 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 LGALSLQ3ZCW2 172 aaPredicted RBP17.19■□□□□ 0.34
TRIM3-206ENST00000528227 GAGE13Q4V321 117 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 RPL7L1Q6DKI1 246 aaKnown RBP17.19■□□□□ 0.34
TRIM3-206ENST00000528227 TM2D2Q9BX73 214 aa17.19■□□□□ 0.34
TRIM3-206ENST00000528227 UFSP1Q6NVU6 142 aa17.18■□□□□ 0.34
TRIM3-206ENST00000528227 RNF222A6NCQ9 220 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 IFNA7P01567 189 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 GIPP09681 153 aaPredicted RBP17.17■□□□□ 0.34
TRIM3-206ENST00000528227 Q86TA4 180 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 INO80EQ8NBZ0 244 aaPredicted RBP17.17■□□□□ 0.34
TRIM3-206ENST00000528227 OR2T35Q8NGX2 323 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 JPT2Q9H910 190 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 IL36BQ9NZH7 164 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 FAM30AQ9NZY2 134 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 Q9UF83 564 aa17.17■□□□□ 0.34
TRIM3-206ENST00000528227 CTXND1A0A1B0GTU2 59 aa17.16■□□□□ 0.34
TRIM3-206ENST00000528227 PEX7O00628 323 aa17.16■□□□□ 0.34
TRIM3-206ENST00000528227 UBE2G2P60604 165 aa17.16■□□□□ 0.34
TRIM3-206ENST00000528227 WFDC2Q14508 124 aa17.16■□□□□ 0.34
TRIM3-206ENST00000528227 SAMD10Q9BYL1 202 aa17.16■□□□□ 0.34
TRIM3-206ENST00000528227 BORCS7-ASMTA0A0B4J1R7 106 aa17.15■□□□□ 0.34
TRIM3-206ENST00000528227 DMBT1Q9UGM3 2413 aaPredicted RBP17.14■□□□□ 0.33
TRIM3-206ENST00000528227 TRAV8-3A0A0A6YYJ7 113 aa17.14■□□□□ 0.33
TRIM3-206ENST00000528227 B4DEV8 164 aa17.14■□□□□ 0.33
TRIM3-206ENST00000528227 H3BVH4 76 aa17.14■□□□□ 0.33
TRIM3-206ENST00000528227 C1QBP02746 253 aa17.14■□□□□ 0.33
TRIM3-206ENST00000528227 DMRTA1Q5VZB9 504 aa17.14■□□□□ 0.33
TRIM3-206ENST00000528227 C14orf178Q8N769 122 aaPredicted RBP17.14■□□□□ 0.33
TRIM3-206ENST00000528227 FXYD6-FXYD2A0A087WZ82 144 aa17.13■□□□□ 0.33
TRIM3-206ENST00000528227 FAM74A7A6NL05 159 aa17.13■□□□□ 0.33
TRIM3-206ENST00000528227 CRIP1P50238 77 aa17.13■□□□□ 0.33
TRIM3-206ENST00000528227 FGF8P55075 233 aaPredicted RBP17.13■□□□□ 0.33
TRIM3-206ENST00000528227 DNLZQ5SXM8 178 aa17.13■□□□□ 0.33
TRIM3-206ENST00000528227 DAZ4Q86SG3 579 aaKnown RBP17.13■□□□□ 0.33
TRIM3-206ENST00000528227 HIST1H2BAQ96A08 127 aa17.13■□□□□ 0.33
TRIM3-206ENST00000528227 NKX6-2Q9C056 277 aaPredicted RBP17.13■□□□□ 0.33
TRIM3-206ENST00000528227 DAZ3Q9NR90 486 aaKnown RBP17.13■□□□□ 0.33
TRIM3-206ENST00000528227 SRRM2Q9UQ35 2752 aaKnown RBP17.13■□□□□ 0.33
TRIM3-206ENST00000528227 MYCBP2O75592 4640 aa17.12■□□□□ 0.33
TRIM3-206ENST00000528227 A0A087WWC5 75 aa17.12■□□□□ 0.33
TRIM3-206ENST00000528227 KRBOX1C9JBD0 128 aa17.12■□□□□ 0.33
TRIM3-206ENST00000528227 ZC2HC1AQ96GY0 325 aa17.12■□□□□ 0.33
TRIM3-206ENST00000528227 TOR2AQ5JU69 321 aa17.11■□□□□ 0.33
TRIM3-206ENST00000528227 COX8CQ7Z4L0 72 aa17.11■□□□□ 0.33
TRIM3-206ENST00000528227 SYT8Q8NBV8 401 aa17.11■□□□□ 0.33
TRIM3-206ENST00000528227 M0R036 132 aa17.1■□□□□ 0.33
TRIM3-206ENST00000528227 RHODO00212 210 aa17.1■□□□□ 0.33
TRIM3-206ENST00000528227 ARMS2P0C7Q2 107 aa17.1■□□□□ 0.33
TRIM3-206ENST00000528227 BATF3Q9NR55 127 aa17.1■□□□□ 0.33
TRIM3-206ENST00000528227 DNAH8Q96JB1 4490 aa17.1■□□□□ 0.33
TRIM3-206ENST00000528227 LECT2O14960 151 aa17.09■□□□□ 0.33
TRIM3-206ENST00000528227 SH2D1AO60880 128 aa17.09■□□□□ 0.33
TRIM3-206ENST00000528227 AKR1C8PQ5T2L2 129 aa17.09■□□□□ 0.33
TRIM3-206ENST00000528227 ZFP30Q9Y2G7 519 aa17.09■□□□□ 0.33
TRIM3-206ENST00000528227 GRIFINA4D1Z8 144 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms