RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RPL39P62891 51 aaKnown RBP9.55□□□□□ -0.88
TSKU-203ENST00000527881 Q6Q795 121 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 ELANEP08246 267 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 CD59P13987 128 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 PMVKQ15126 192 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 C9orf153Q5TBE3 101 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 FANCD2OSQ96PS1 177 aa9.55□□□□□ -0.88
TSKU-203ENST00000527881 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
TSKU-203ENST00000527881 LYNX1G3V0Z9 82 aa9.54□□□□□ -0.88
TSKU-203ENST00000527881 IGLV1-47P01700 117 aa9.54□□□□□ -0.88
TSKU-203ENST00000527881 LYNX1P0DP58 116 aa9.54□□□□□ -0.88
TSKU-203ENST00000527881 SPANXA1Q9NS26 97 aa9.54□□□□□ -0.88
TSKU-203ENST00000527881 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
TSKU-203ENST00000527881 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
TSKU-203ENST00000527881 SPTBN1Q01082 2364 aaKnown RBP9.53□□□□□ -0.88
TSKU-203ENST00000527881 FAM236AA0A1B0GUQ0 79 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 FAM236BA0A1B0GV22 79 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
TSKU-203ENST00000527881 TACC2O95359 2948 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 CTSGP08311 255 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 NPC2P61916 151 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 IGLV11-55A0A075B6I3 123 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 LGALS9O00182 355 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 COX6CP09669 75 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 C16orf92Q96LL3 132 aa9.53□□□□□ -0.88
TSKU-203ENST00000527881 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
TSKU-203ENST00000527881 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 ZZEF1O43149 2961 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 DMDP11532 3685 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 BOD1L1Q8NFC6 3051 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 ATP5J2P56134 94 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 ECSCRQ19T08 205 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 PRR30Q53SZ7 412 aaPredicted RBP9.52□□□□□ -0.89
TSKU-203ENST00000527881 TMEM101Q96IK0 257 aa9.52□□□□□ -0.89
TSKU-203ENST00000527881 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 CRYGDP07320 174 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 ARRDC1-AS1Q9H2J1 176 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 MBD3L4A6NDZ8 208 aaPredicted RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 MBD3L3A6NE82 208 aaPredicted RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 MBD3L5A6NJ08 208 aaPredicted RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 MBD3L2Q8NHZ7 208 aaPredicted RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
TSKU-203ENST00000527881 MSRB2Q9Y3D2 182 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 TRIOBPQ9H2D6 2365 aa9.51□□□□□ -0.89
TSKU-203ENST00000527881 TRGV11A0A075B6L2 103 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 TRIAP1O43715 76 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 IGF1P05019 195 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 NDPQ00604 133 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
TSKU-203ENST00000527881 ZNF672Q499Z4 452 aaPredicted RBP9.5□□□□□ -0.89
TSKU-203ENST00000527881 UBTD1Q9HAC8 227 aa9.5□□□□□ -0.89
TSKU-203ENST00000527881 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 C15orf32Q32M92 178 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 CLEC2BQ92478 149 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 RNF5Q99942 180 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 DPM3Q9P2X0 92 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 M0R2P5 195 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 P0DMU3 169 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 CLEC19AQ6UXS0 136 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
TSKU-203ENST00000527881 DEFB109BQ30KR1 87 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 ZNRF2Q8NHG8 242 aa9.49□□□□□ -0.89
TSKU-203ENST00000527881 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
TSKU-203ENST00000527881 OOSP1A8MZH6 123 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 BUB3O43684 328 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 PPP1R17O96001 155 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 CD3EP07766 207 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 PRR9Q5T870 116 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
TSKU-203ENST00000527881 AKAP6Q13023 2319 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 A0A087WWL8 130 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 A0A0B4J2C4 111 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 TSHBP01222 138 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 DEFB1P60022 68 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 NUP37Q8NFH4 326 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 METTL26Q96S19 204 aa9.48□□□□□ -0.89
TSKU-203ENST00000527881 TRAV12-3A0A0B4J271 114 aa9.47□□□□□ -0.89
TSKU-203ENST00000527881 GNRH2O43555 120 aa9.47□□□□□ -0.89
TSKU-203ENST00000527881 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
TSKU-203ENST00000527881 FAM215AQ9Y5M1 114 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 229.6 ms