RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 PEX7O00628 323 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 ARPC5O15511 151 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
SCN3B-204ENST00000527836 ASIPP42127 132 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 STOML3Q8TAV4 291 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 HIST1H2BAQ96A08 127 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 LINC00479Q96M42 142 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 C9orf85Q96MD7 179 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 ARL2-SNX15V9GYD0 113 aa8.41□□□□□ -1.06
SCN3B-204ENST00000527836 A0A087WTM6 91 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 MAP1LC3B2A6NCE7 125 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
SCN3B-204ENST00000527836 TIRAPP58753 221 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 UBE2G1P62253 170 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 ZNF726P1Q15940 193 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 CST9LP1Q5W188 147 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 Q8N1X5 172 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 MAP1LC3BQ9GZQ8 125 aa8.4□□□□□ -1.06
SCN3B-204ENST00000527836 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 A8MWV9 139 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 B4DEV8 164 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
SCN3B-204ENST00000527836 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 Q86TA4 180 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 SYT8Q8NBV8 401 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 PTH2Q96A98 100 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 Q9HAA7 133 aa8.39□□□□□ -1.07
SCN3B-204ENST00000527836 IGKV3D-20A0A0C4DH25 116 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 M0R036 132 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 LINC01556Q5JQF7 62 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 LELP1Q5T871 98 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 ABCA13Q86UQ4 5058 aa8.38□□□□□ -1.07
SCN3B-204ENST00000527836 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 H3BVH4 76 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 GAGE1Q13065 139 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 GAGE4Q13068 117 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 GAGE5Q13069 117 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 FAM162BQ5T6X4 162 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 FMC1Q96HJ9 113 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 PARLQ9H300 379 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 IL36BQ9NZH7 164 aa8.37□□□□□ -1.07
SCN3B-204ENST00000527836 AKR1C3P42330 323 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 PIK3CD-AS1Q5SR53 167 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 OR11H4Q8NGC9 324 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 TCEAL7Q9BRU2 100 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
SCN3B-204ENST00000527836 TMSB15BA0A087X1C1 80 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 GRIFINA4D1Z8 144 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 IBA57-AS1B1ANH7 110 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 SMLR1H3BR10 107 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 RHODO00212 210 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 SH2D1AO60880 128 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 TPT1P13693 172 aaKnown RBP8.35□□□□□ -1.07
SCN3B-204ENST00000527836 URGCP-MRPS24S4R325 110 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 HSPG2P98160 4391 aa8.35□□□□□ -1.07
SCN3B-204ENST00000527836 IGLV5-52A0A0A0MRZ9 124 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 A0A1B0GV50 99 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 KANTRA0A1W2PQU2 76 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 EPM2AB3EWF7 344 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 M0R381 172 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 PFDN1O60925 122 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 GCSHP23434 173 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 FHITP49789 147 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 Q6ZSN1 163 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 FAM213BQ8TBF2 198 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 SFT2D1Q8WV19 159 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 TM2D2Q9BX73 214 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 CYTL1Q9NRR1 136 aa8.34□□□□□ -1.07
SCN3B-204ENST00000527836 A0A087WWC5 75 aa8.33□□□□□ -1.08
SCN3B-204ENST00000527836 UMAD1C9J7I0 102 aa8.33□□□□□ -1.08
SCN3B-204ENST00000527836 G3V3Q6 166 aa8.33□□□□□ -1.08
SCN3B-204ENST00000527836 PAGE4O60829 102 aa8.33□□□□□ -1.08
SCN3B-204ENST00000527836 ZNF471Q9BX82 626 aaPredicted RBP8.33□□□□□ -1.08
SCN3B-204ENST00000527836 JPT2Q9H910 190 aa8.33□□□□□ -1.08
SCN3B-204ENST00000527836 A0A087WWL8 130 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 S100A9P06702 114 aaKnown RBP8.32□□□□□ -1.08
SCN3B-204ENST00000527836 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 CRIP1P50238 77 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
SCN3B-204ENST00000527836 ZNF345Q14585 488 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 LAGE3Q14657 143 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms