RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SUMO2P61956 95 aaKnown RBP11.5□□□□□ -0.57
USH1C-207ENST00000527720 C14orf178Q8N769 122 aaPredicted RBP11.5□□□□□ -0.57
USH1C-207ENST00000527720 RASL10AQ92737 203 aa11.5□□□□□ -0.57
USH1C-207ENST00000527720 K7EQG2 157 aa11.49□□□□□ -0.57
USH1C-207ENST00000527720 IGKCP01834 107 aa11.49□□□□□ -0.57
USH1C-207ENST00000527720 FOXC2Q99958 501 aa11.49□□□□□ -0.57
USH1C-207ENST00000527720 ZNF462Q96JM2 2506 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 A0A0J9YX75 114 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 C7orf71A4D174 169 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 DPM2O94777 84 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 SEC11AP67812 179 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 Q5PR19 223 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 HHLA3Q9XRX5 114 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 TMEM97Q5BJF2 176 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 FBN2P35556 2912 aa11.48□□□□□ -0.57
USH1C-207ENST00000527720 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 IGHV4OR15-8A0A075B7B6 117 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 A0A087WW49 117 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 TAX1BP3O14907 124 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 HOXA3O43365 443 aaPredicted RBP11.47□□□□□ -0.57
USH1C-207ENST00000527720 ZNF688P0C7X2 276 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 USP9YO00507 2555 aaPredicted RBP11.47□□□□□ -0.57
USH1C-207ENST00000527720 MGPP08493 103 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 KRTAP10-9P60411 292 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 Q8N2B8 174 aa11.47□□□□□ -0.57
USH1C-207ENST00000527720 A0A087WX48 190 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.46□□□□□ -0.57
USH1C-207ENST00000527720 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.57
USH1C-207ENST00000527720 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 HOXD3P31249 432 aaPredicted RBP11.46□□□□□ -0.57
USH1C-207ENST00000527720 NMUP48645 174 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
USH1C-207ENST00000527720 UBE2V1Q13404 147 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 TOMM6Q96B49 74 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
USH1C-207ENST00000527720 HSD52Q0P140 79 aa11.46□□□□□ -0.58
USH1C-207ENST00000527720 Q6ZVH6 145 aa11.46□□□□□ -0.58
USH1C-207ENST00000527720 TRAV12-3A0A0B4J271 114 aa11.45□□□□□ -0.58
USH1C-207ENST00000527720 SPRY2O43597 315 aa11.45□□□□□ -0.58
USH1C-207ENST00000527720 PTTG1IPP53801 180 aa11.45□□□□□ -0.58
USH1C-207ENST00000527720 RPL39LQ96EH5 51 aaKnown RBP11.45□□□□□ -0.58
USH1C-207ENST00000527720 CD7P09564 240 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 PLNP26678 52 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 TMEM238LA0A1B0GVL6 79 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 CDKN1BP46527 198 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 LINC00315P59091 139 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 ADAMTSL5Q6ZMM2 481 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 PCP2Q8IVA1 136 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 LRRK2Q5S007 2527 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 CSMD2Q7Z408 3487 aa11.44□□□□□ -0.58
USH1C-207ENST00000527720 LINC01549A6NIU2 74 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 FOXI2Q6ZQN5 318 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 C9orf85Q96MD7 179 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
USH1C-207ENST00000527720 HIGD1BQ9P298 99 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 COTL1Q14019 142 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 Q96MF0 132 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 DOPEY2Q9Y3R5 2298 aa11.43□□□□□ -0.58
USH1C-207ENST00000527720 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 A6NDN8 102 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 H7C1H1 209 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 CCL25O15444 150 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 SCGB3A1Q96QR1 104 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 TMEM160Q9NX00 188 aa11.42□□□□□ -0.58
USH1C-207ENST00000527720 IGKV2D-26A0A0A0MRZ7 120 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 F8VRH5 84 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 TCTAP57738 103 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 VAMP3Q15836 100 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 TEX29Q8N6K0 151 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 SYT8Q8NBV8 401 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 WFDC12Q8WWY7 111 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 AGRNO00468 2067 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 POLQO75417 2590 aa11.41□□□□□ -0.58
USH1C-207ENST00000527720 IGHV1OR15-1A0A075B7D0 117 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 CBY3A6NI87 242 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 TCTEX1D4Q5JR98 221 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 C2orf66Q6UXQ4 117 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 TRAV2A0A0B4J234 112 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 TMEM86BQ8N661 226 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
USH1C-207ENST00000527720 PTPN13Q12923 2485 aa11.4□□□□□ -0.59
USH1C-207ENST00000527720 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
USH1C-207ENST00000527720 SUMO4Q6EEV6 95 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 ERASQ7Z444 233 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 GTSCR1Q86UQ5 136 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 KRTAP1-3Q8IUG1 177 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 DUX5Q96PT3 197 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 TRAV12-2A0A075B6T6 113 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 LINC01619G3V211 115 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 PEMTQ9UBM1 199 aa11.39□□□□□ -0.59
USH1C-207ENST00000527720 TRBV6-5A0A0K0K1A5 114 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms