RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 PRSS46E5RG02 174 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 H3BRN7 92 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 GAGE7O76087 117 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 CXorf1O96002 111 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 GAGE12FP0CL80 117 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 GAGE12GP0CL81 117 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 GAGE12IP0CL82 117 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 SELENOTP62341 195 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 SFRP2Q96HF1 295 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 Q9H8V8 135 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 HIGD1AQ9Y241 93 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 HMGB3O15347 200 aaKnown RBP6.88□□□□□ -1.31
CAPN1-210ENST00000527699 RAB31Q13636 194 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 OR10G8Q8NGN5 311 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 SHANK2-AS3Q9BTD1 123 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 ZNF586Q9NXT0 402 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 WDR83OSQ9Y284 106 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 TIMM8BQ9Y5J9 83 aaPredicted RBP6.88□□□□□ -1.31
CAPN1-210ENST00000527699 VPS13BQ7Z7G8 4022 aa6.88□□□□□ -1.31
CAPN1-210ENST00000527699 PMS2P5A8MQ11 134 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 C9JCJ5 164 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 EREGO14944 169 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 HYPMO75409 117 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 LINC00869P0C866 280 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 PSG3Q16557 428 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 CST9LP1Q5W188 147 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 TEX43Q6ZNM6 134 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 MIEN1Q9BRT3 115 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 VAMP8Q9BV40 100 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
CAPN1-210ENST00000527699 PRAC2D3DTV9 90 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 DLEU1O43261 78 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 CRISP2P16562 243 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 BTF3P20290 206 aaKnown RBP6.86□□□□□ -1.31
CAPN1-210ENST00000527699 TSPOP30536 169 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 ATP5IP56385 69 aaPredicted RBP6.86□□□□□ -1.31
CAPN1-210ENST00000527699 Q0VG73 95 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 ESRGQ1W209 222 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 OR10J3Q5JRS4 329 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 PATE2Q6UY27 113 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 C16orf74Q96GX8 76 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 GPR82Q96P67 336 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 SAMD10Q9BYL1 202 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 FAT1Q14517 4588 aa6.86□□□□□ -1.31
CAPN1-210ENST00000527699 FNDC10F2Z333 226 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 SLC17A3O00476 420 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 STAG3L2P0CL84 134 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 STAG3L3P0CL85 134 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 ZNF25P17030 456 aaPredicted RBP6.85□□□□□ -1.31
CAPN1-210ENST00000527699 RPL7P18124 248 aaKnown RBP6.85□□□□□ -1.31
CAPN1-210ENST00000527699 CDKN1BP46527 198 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 COL5A1-AS1Q5SY13 56 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 C11orf52Q96A22 123 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 GNB1LQ9BYB4 327 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 TMEM167BQ9NRX6 74 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 SLC45A2Q9UMX9 530 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
CAPN1-210ENST00000527699 TRAV12-3A0A0B4J271 114 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 NDUFB4O95168 129 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
CAPN1-210ENST00000527699 MORN5Q5VZ52 161 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 BAGE3Q86Y29 109 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 BAGE2Q86Y30 109 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 LYPD1Q8N2G4 141 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 TMEM256Q8N2U0 113 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
CAPN1-210ENST00000527699 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
CAPN1-210ENST00000527699 NPVFQ9HCQ7 196 aa6.84□□□□□ -1.31
CAPN1-210ENST00000527699 A0A087X0K7 114 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 A0A096LPF7 62 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 TRAV5A0A0B4J249 113 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 C20orf202A1L168 122 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 SNURFLB1AK76 121 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 OR10J4P0C629 311 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 UBE2G2P60604 165 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 SUMO1P63165 101 aaKnown RBP6.83□□□□□ -1.32
CAPN1-210ENST00000527699 ERCC8Q13216 396 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 FAM162BQ5T6X4 162 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 RASL11AQ6T310 242 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 Q6ZTI0 123 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 LINC00305Q7Z4B0 112 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 OR10J6PQ8NGY7 276 aa6.83□□□□□ -1.32
CAPN1-210ENST00000527699 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
CAPN1-210ENST00000527699 MRPS12O15235 138 aaKnown RBP6.82□□□□□ -1.32
CAPN1-210ENST00000527699 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
CAPN1-210ENST00000527699 ARL14EPLP0DKL9 152 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 G0S2P27469 103 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 GCHFRP30047 84 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 S100A7P31151 101 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 LINC00315P59091 139 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 TAS2R45P59539 299 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 PMCHL1Q16048 86 aa6.82□□□□□ -1.32
CAPN1-210ENST00000527699 TTC32Q5I0X7 151 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms