RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 LRCOL1A6NCL2 159 aa15□□□□□ -0.01
TRAPPC4-208ENST00000527680 MGST1P10620 155 aaKnown RBP15□□□□□ -0.01
TRAPPC4-208ENST00000527680 S100A4P26447 101 aaKnown RBP15□□□□□ -0.01
TRAPPC4-208ENST00000527680 SAPCD1Q5SSQ6 148 aa15□□□□□ -0.01
TRAPPC4-208ENST00000527680 CYB561D1Q8N8Q1 229 aa15□□□□□ -0.01
TRAPPC4-208ENST00000527680 SUN5Q8TC36 379 aa15□□□□□ -0.01
TRAPPC4-208ENST00000527680 GTSF1LQ9H1H1 148 aa15□□□□□ -0.01
TRAPPC4-208ENST00000527680 FAM229AH3BQW9 127 aa14.99□□□□□ -0.01
TRAPPC4-208ENST00000527680 IGLV2-11P01706 119 aa14.99□□□□□ -0.01
TRAPPC4-208ENST00000527680 HAMPP81172 84 aa14.99□□□□□ -0.01
TRAPPC4-208ENST00000527680 NTN5Q8WTR8 489 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC4-208ENST00000527680 MED28Q9H204 178 aa14.99□□□□□ -0.01
TRAPPC4-208ENST00000527680 LGALSLQ3ZCW2 172 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC4-208ENST00000527680 PTH2Q96A98 100 aa14.98□□□□□ -0.01
TRAPPC4-208ENST00000527680 AQP10Q96PS8 301 aa14.98□□□□□ -0.01
TRAPPC4-208ENST00000527680 TNFSF18Q9UNG2 199 aa14.98□□□□□ -0.01
TRAPPC4-208ENST00000527680 GGTLC3B5MD39 225 aa14.97□□□□□ -0.01
TRAPPC4-208ENST00000527680 RNASE3P12724 160 aaKnown RBP14.97□□□□□ -0.01
TRAPPC4-208ENST00000527680 SH3BGRL3Q9H299 93 aa14.97□□□□□ -0.01
TRAPPC4-208ENST00000527680 TRAV34A0A0B4J273 112 aa14.96□□□□□ -0.01
TRAPPC4-208ENST00000527680 IFNA7P01567 189 aa14.96□□□□□ -0.01
TRAPPC4-208ENST00000527680 Q8N814 137 aa14.96□□□□□ -0.01
TRAPPC4-208ENST00000527680 LINC00479Q96M42 142 aa14.96□□□□□ -0.01
TRAPPC4-208ENST00000527680 TM2D2Q9BX73 214 aa14.96□□□□□ -0.01
TRAPPC4-208ENST00000527680 GAGE12JA6NER3 117 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 FABP5P3A8MUU1 101 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 GAGE1Q13065 139 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 GAGE4Q13068 117 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 GAGE5Q13069 117 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 GAGE13Q4V321 117 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 INO80EQ8NBZ0 244 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 OR2T35Q8NGX2 323 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 TMEM70Q9BUB7 260 aa14.95□□□□□ -0.02
TRAPPC4-208ENST00000527680 A8MWV9 139 aa14.94□□□□□ -0.02
TRAPPC4-208ENST00000527680 IGKV3D-20A0A0C4DH25 116 aa14.93□□□□□ -0.02
TRAPPC4-208ENST00000527680 A0A1W2PRE2 83 aa14.93□□□□□ -0.02
TRAPPC4-208ENST00000527680 ASIPP42127 132 aa14.93□□□□□ -0.02
TRAPPC4-208ENST00000527680 Q6ZSN1 163 aa14.93□□□□□ -0.02
TRAPPC4-208ENST00000527680 PARLQ9H300 379 aa14.93□□□□□ -0.02
TRAPPC4-208ENST00000527680 ARL2-SNX15V9GYD0 113 aa14.93□□□□□ -0.02
TRAPPC4-208ENST00000527680 FAT1Q14517 4588 aa14.92□□□□□ -0.02
TRAPPC4-208ENST00000527680 BORCS7-ASMTA0A0B4J1R7 106 aa14.92□□□□□ -0.02
TRAPPC4-208ENST00000527680 UBE2G2P60604 165 aa14.92□□□□□ -0.02
TRAPPC4-208ENST00000527680 Q5BKY6 102 aa14.92□□□□□ -0.02
TRAPPC4-208ENST00000527680 ZFP2Q6ZN57 461 aa14.92□□□□□ -0.02
TRAPPC4-208ENST00000527680 LAGE3Q14657 143 aa14.91□□□□□ -0.02
TRAPPC4-208ENST00000527680 RPL7L1Q6DKI1 246 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-208ENST00000527680 B4DEV8 164 aa14.9□□□□□ -0.02
TRAPPC4-208ENST00000527680 FGF8P55075 233 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC4-208ENST00000527680 Q8N3U1 123 aa14.9□□□□□ -0.02
TRAPPC4-208ENST00000527680 JPT2Q9H910 190 aa14.9□□□□□ -0.02
TRAPPC4-208ENST00000527680 TRAV8-3A0A0A6YYJ7 113 aa14.89□□□□□ -0.03
TRAPPC4-208ENST00000527680 PIK3CD-AS1Q5SR53 167 aa14.89□□□□□ -0.03
TRAPPC4-208ENST00000527680 FXYD6-FXYD2A0A087WZ82 144 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 CTXND1A0A1B0GTU2 59 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 PEX7O00628 323 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 PTTG1O95997 202 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 TOR2AQ5JU69 321 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 DMRTA1Q5VZB9 504 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 DAZ4Q86SG3 579 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 SYT8Q8NBV8 401 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 SAMD10Q9BYL1 202 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 NKX6-2Q9C056 277 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 DAZ3Q9NR90 486 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 IL36BQ9NZH7 164 aa14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 DMBT1Q9UGM3 2413 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-208ENST00000527680 A0A087WWC5 75 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 H3BVH4 76 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 M0R036 132 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 LECT2O14960 151 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 GIPP09681 153 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 ZNF726P1Q15940 193 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 AKR1C8PQ5T2L2 129 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 FAM30AQ9NZY2 134 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 Q9UF83 564 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 URGCP-MRPS24S4R325 110 aa14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 FLG2Q5D862 2391 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-208ENST00000527680 ARMS2P0C7Q2 107 aa14.86□□□□□ -0.03
TRAPPC4-208ENST00000527680 FAM74A4Q5TZK3 123 aa14.86□□□□□ -0.03
TRAPPC4-208ENST00000527680 HIST1H2BAQ96A08 127 aa14.86□□□□□ -0.03
TRAPPC4-208ENST00000527680 GRIFINA4D1Z8 144 aa14.85□□□□□ -0.03
TRAPPC4-208ENST00000527680 Q86TA4 180 aa14.85□□□□□ -0.03
TRAPPC4-208ENST00000527680 OR11H4Q8NGC9 324 aa14.85□□□□□ -0.03
TRAPPC4-208ENST00000527680 RNF222A6NCQ9 220 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 FAM74A7A6NL05 159 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 KRBOX1C9JBD0 128 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 RHODO00212 210 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 WFDC2Q14508 124 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 BATF3Q9NR55 127 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 ZFP30Q9Y2G7 519 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 PHLDA3Q9Y5J5 127 aa14.84□□□□□ -0.03
TRAPPC4-208ENST00000527680 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 C1QBP02746 253 aa14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 CRIP1P50238 77 aa14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 UBE2G1P62253 170 aa14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 UFSP1Q6NVU6 142 aa14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 BAALCQ8WXS3 180 aa14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 ZC2HC1AQ96GY0 325 aa14.83□□□□□ -0.04
TRAPPC4-208ENST00000527680 COX11Q9Y6N1 276 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms