RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 RHOHQ15669 191 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 NKX6-2Q9C056 277 aaPredicted RBP9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 MAP1LC3BQ9GZQ8 125 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 CYTL1Q9NRR1 136 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 MSRB1Q9NZV6 116 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 IGHV3-73A0A0B4J1V6 119 aa9.21□□□□□ -0.94
SSSCA1-204ENST00000527413 IGKV3D-20A0A0C4DH25 116 aa9.21□□□□□ -0.94
SSSCA1-204ENST00000527413 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.94
SSSCA1-204ENST00000527413 EREGO14944 169 aa9.21□□□□□ -0.94
SSSCA1-204ENST00000527413 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.94
SSSCA1-204ENST00000527413 FABP5P3A8MUU1 101 aa9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 SMLR1H3BR10 107 aa9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 CRYGDP07320 174 aa9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 MGST1P10620 155 aaKnown RBP9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 S100A4P26447 101 aaKnown RBP9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 ASIPP42127 132 aa9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 C10orf126Q8N4M7 172 aa9.2□□□□□ -0.94
SSSCA1-204ENST00000527413 A0A087WTM6 91 aa9.19□□□□□ -0.94
SSSCA1-204ENST00000527413 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
SSSCA1-204ENST00000527413 ZNF345Q14585 488 aa9.19□□□□□ -0.94
SSSCA1-204ENST00000527413 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
SSSCA1-204ENST00000527413 PARLQ9H300 379 aa9.19□□□□□ -0.94
SSSCA1-204ENST00000527413 A8MWV9 139 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 B4DEV8 164 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 FHITP49789 147 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 UBE2G1P62253 170 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 PIK3CD-AS1Q5SR53 167 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 CDPF1Q6NVV7 123 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 COX8CQ7Z4L0 72 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 KCNRGQ8N5I3 272 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 IL36BQ9NZH7 164 aa9.18□□□□□ -0.94
SSSCA1-204ENST00000527413 TRAV8-6A0A0B4J262 113 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 H3BVH4 76 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 SH2D1AO60880 128 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 CRIP1P50238 77 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 LELP1Q5T871 98 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 Q8N1X5 172 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 STOML3Q8TAV4 291 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 TCEAL7Q9BRU2 100 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SSSCA1-204ENST00000527413 TRBV6-1A0A0K0K1D8 114 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 KRBOX1C9JBD0 128 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 M0R036 132 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 CST9LP1Q5W188 147 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 Q6ZSN1 163 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 GTSF1LQ9H1H1 148 aa9.16□□□□□ -0.94
SSSCA1-204ENST00000527413 LTAP01374 205 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 SEC11BP0C7V7 166 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 AKR1C3P42330 323 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 UFSP1Q6NVU6 142 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 JPT2Q9H910 190 aa9.15□□□□□ -0.94
SSSCA1-204ENST00000527413 GRIFINA4D1Z8 144 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 GAGE12JA6NER3 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 HMSDA8MTL9 139 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 BCL2L11O43521 198 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 PAGE4O60829 102 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 IGHV3-30P01768 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 IGHV3-33P01772 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 IGHV3-30-5P0DP03 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 GAGE1Q13065 139 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 GAGE4Q13068 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 GAGE5Q13069 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 ZNF674Q2M3X9 581 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 OR11H4Q8NGC9 324 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 FAM213BQ8TBF2 198 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 ZNF471Q9BX82 626 aaPredicted RBP9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 SAMD10Q9BYL1 202 aa9.14□□□□□ -0.95
SSSCA1-204ENST00000527413 A0A1B0GV50 99 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 KANTRA0A1W2PQU2 76 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 RHODO00212 210 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 PSCAO43653 123 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 SFT2D1Q8WV19 159 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 MBD3L1Q8WWY6 194 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 Q9HAA7 133 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 SCRT2Q9NQ03 307 aa9.13□□□□□ -0.95
SSSCA1-204ENST00000527413 TMSB15BA0A087X1C1 80 aa9.12□□□□□ -0.95
SSSCA1-204ENST00000527413 A0A0D9SG52 128 aa9.12□□□□□ -0.95
SSSCA1-204ENST00000527413 TPT1P13693 172 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms