RNA–Protein interactions for RNA: ENST00000527317.2

AP001993.1-201, humanhuman

TSL 2 BASIC

Gene AP001993.1, Length 2,337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001993.1-201ENST00000527317 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
AP001993.1-201ENST00000527317 XCL2Q9UBD3 114 aa8.31□□□□□ -1.08
AP001993.1-201ENST00000527317 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
AP001993.1-201ENST00000527317 Q6JHZ5 121 aa8.31□□□□□ -1.08
AP001993.1-201ENST00000527317 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
AP001993.1-201ENST00000527317 NBEAQ8NFP9 2946 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 I3L3M4 83 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 TIMM17BO60830 172 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 LOXP28300 417 aaPredicted RBP8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 SNRPD3P62318 126 aaKnown RBP8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 MSMPQ1L6U9 139 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 WDR86Q86TI4 376 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 RNF7Q9UBF6 113 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 CCKP06307 115 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 CD40P25942 277 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 HOXA4Q00056 320 aaPredicted RBP8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 CCL14Q16627 93 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 ZFHX3Q15911 3703 aa8.3□□□□□ -1.08
AP001993.1-201ENST00000527317 RBMY1BA6NDE4 496 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 RBMY1EA6NEQ0 496 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 RBMY1DP0C7P1 496 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 RBMY1A1P0DJD3 496 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 RBMY1CP0DJD4 496 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 RBMY1FQ15415 496 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 ARHGAP32A7KAX9 2087 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 PAX4O43316 350 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 RPS21P63220 83 aaKnown RBP8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 COPS9Q8WXC6 57 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 FANCD2OSQ96PS1 177 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 TMEM14CQ9P0S9 112 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 UBE2D4Q9Y2X8 147 aa8.29□□□□□ -1.08
AP001993.1-201ENST00000527317 SPEGQ15772 3267 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 TRBV7-6A0A0J9YX20 115 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 A0A1W2PP55 124 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 A0A1W2PQU0 124 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 GNG12Q9UBI6 72 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 GHRHP01286 108 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 IGHV4-34P06331 123 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 DCTN5Q9BTE1 182 aa8.28□□□□□ -1.08
AP001993.1-201ENST00000527317 TRBV19A0A075B6N1 114 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 IGHV1-45A0A0A0MS14 117 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 E7EUB6 86 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 TRGV3P03979 118 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 SAA4P35542 130 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 RUSC1-AS1Q66K80 236 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 Q6ZSV7 163 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 DEFB126Q9BYW3 111 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 MGAQ8IWI9 3026 aa8.27□□□□□ -1.09
AP001993.1-201ENST00000527317 SUB1P53999 127 aaKnown RBP eCLIP8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 DLX1P56177 255 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 ERHP84090 104 aaKnown RBP8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 CFHR3Q02985 330 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 COX8CQ7Z4L0 72 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 IGHV3-20A0A0C4DH32 117 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 U3KQE9 123 aa8.26□□□□□ -1.09
AP001993.1-201ENST00000527317 TFF1P04155 84 aa8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 IGHV3-64DA0A0J9YX35 117 aa8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 H0Y8X5 98 aa8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 DKK1O94907 266 aa8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 ZNF80P51504 273 aaPredicted RBP8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 C5orf42Q9H799 3197 aa8.25□□□□□ -1.09
AP001993.1-201ENST00000527317 PCOLCEQ15113 449 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 NFAM1Q8NET5 270 aaPredicted RBP8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 SRXN1Q9BYN0 137 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 CFAP54Q96N23 3096 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 TRAV12-3A0A0B4J271 114 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 M0R1W7 72 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 RBM3P98179 157 aaKnown RBP8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 MOB4Q9Y3A3 225 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 FRYQ5TBA9 3013 aa8.24□□□□□ -1.09
AP001993.1-201ENST00000527317 PLAC8L1A1L4L8 177 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 TSHBP01222 138 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 SAA2P0DJI9 122 aaPredicted RBP8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 PLGLAQ15195 96 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 Q9UF83 564 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 KNL1Q8NG31 2342 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 NTN3O00634 580 aaPredicted RBP8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 IGKV1-16P04430 117 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 WT1-ASQ06250 92 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 C11orf45Q8TAV5 145 aa8.23□□□□□ -1.09
AP001993.1-201ENST00000527317 A0A0J9YX75 114 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 SDHAF1A6NFY7 115 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 SAA1P0DJI8 122 aaPredicted RBP8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 HILS1P60008 231 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 Q6ZS52 159 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 VSIG2Q96IQ7 327 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 LITAFQ99732 161 aa8.22□□□□□ -1.09
AP001993.1-201ENST00000527317 BPESC1Q9GZL8 116 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms