RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 FAM19A4Q96LR4 140 aa8.03□□□□□ -1.12
CTSB-214ENST00000527243 PSG8Q9UQ74 426 aa8.03□□□□□ -1.12
CTSB-214ENST00000527243 TRAV12-2A0A075B6T6 113 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 IGHV3OR16-12A0A075B7B8 117 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 TMEM189A5PLL7 270 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 C19orf71A6NCJ1 209 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 FABP4P15090 132 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 CDKN1BP46527 198 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 RAB4BP61018 213 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 C12orf74Q32Q52 190 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 FAM162BQ5T6X4 162 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 OR10D4PQ8NGN7 298 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
CTSB-214ENST00000527243 NDFIP1Q9BT67 221 aa8.02□□□□□ -1.13
CTSB-214ENST00000527243 A0A1B0GW15 77 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 PLAC8L1A1L4L8 177 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 APCSP02743 223 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 PRM2P04554 102 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 TSPOP30536 169 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 TCL1AP56279 114 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 Q0VG73 95 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 ERCC8Q13216 396 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 OR10J3Q5JRS4 329 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 GFI1BQ5VTD9 330 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 Q6ZTC4 211 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 BORCS7Q96B45 105 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 AGPAT4-IT1Q9H0P7 198 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 NIT2Q9NQR4 276 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 DKK2Q9UBU2 259 aa8.01□□□□□ -1.13
CTSB-214ENST00000527243 RBAKDNA6NC62 111 aa8□□□□□ -1.13
CTSB-214ENST00000527243 HIGD1CA8MV81 97 aa8□□□□□ -1.13
CTSB-214ENST00000527243 KLLNB2CW77 178 aa8□□□□□ -1.13
CTSB-214ENST00000527243 IGLV2-11P01706 119 aa8□□□□□ -1.13
CTSB-214ENST00000527243 RPS20P60866 119 aaKnown RBP8□□□□□ -1.13
CTSB-214ENST00000527243 HBBP68871 147 aa8□□□□□ -1.13
CTSB-214ENST00000527243 RRN3P1Q2M238 152 aa8□□□□□ -1.13
CTSB-214ENST00000527243 PDZD11Q5EBL8 140 aa8□□□□□ -1.13
CTSB-214ENST00000527243 MRPL54Q6P161 138 aaKnown RBP8□□□□□ -1.13
CTSB-214ENST00000527243 BAGE3Q86Y29 109 aa8□□□□□ -1.13
CTSB-214ENST00000527243 TMEM256Q8N2U0 113 aa8□□□□□ -1.13
CTSB-214ENST00000527243 NUP35Q8NFH5 326 aa8□□□□□ -1.13
CTSB-214ENST00000527243 LINC00477Q96M19 166 aa8□□□□□ -1.13
CTSB-214ENST00000527243 C20orf144Q9BQM9 153 aa8□□□□□ -1.13
CTSB-214ENST00000527243 KLK5Q9Y337 293 aaPredicted RBP8□□□□□ -1.13
CTSB-214ENST00000527243 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
CTSB-214ENST00000527243 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
CTSB-214ENST00000527243 ESDP10768 282 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 AZU1P20160 251 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 FAM222AQ5U5X8 452 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 COX8CQ7Z4L0 72 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 ZFAND2AQ8N6M9 145 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 VGLL1Q99990 258 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 TMEM208Q9BTX3 173 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 PPP1R14DQ9NXH3 145 aa7.99□□□□□ -1.13
CTSB-214ENST00000527243 TRAV10A0A0B4J240 114 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 TRBV7-9A0A0J9YWB2 115 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 TEX48A0A1B0GUV7 120 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 SPINK4O60575 86 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 LEPP41159 167 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 FOXA3P55318 350 aaPredicted RBP7.98□□□□□ -1.13
CTSB-214ENST00000527243 RIGQ13278 110 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 LINC00476Q8WZB0 136 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 SGK494Q96LW2 274 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 LINC01587Q99440 93 aa7.98□□□□□ -1.13
CTSB-214ENST00000527243 TRAV8-1A0A0A6YYK1 113 aa7.97□□□□□ -1.13
CTSB-214ENST00000527243 A0A1B0GXF2 115 aa7.97□□□□□ -1.13
CTSB-214ENST00000527243 PCP4L1A6NKN8 68 aa7.97□□□□□ -1.13
CTSB-214ENST00000527243 ZNF324O75467 553 aaPredicted RBP7.97□□□□□ -1.13
CTSB-214ENST00000527243 EMP1P54849 157 aa7.97□□□□□ -1.13
CTSB-214ENST00000527243 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
CTSB-214ENST00000527243 PYY3Q5JQD4 70 aa7.97□□□□□ -1.13
CTSB-214ENST00000527243 RNASE8Q8TDE3 154 aaKnown RBP7.97□□□□□ -1.13
CTSB-214ENST00000527243 ZC2HC1AQ96GY0 325 aa7.97□□□□□ -1.13
CTSB-214ENST00000527243 LYRM9A8MSI8 78 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 ZNF138P52744 262 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 TCTAP57738 103 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 IQCJQ1A5X6 159 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 PRR9Q5T870 116 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 ZNF493Q6ZR52 646 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 SAMD10Q9BYL1 202 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 APLNQ9ULZ1 77 aa7.96□□□□□ -1.14
CTSB-214ENST00000527243 KMT2AQ03164 3969 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 TRAV12-3A0A0B4J271 114 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 A0A1B0GUT8 65 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 C7orf71A4D174 169 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 GRIFINA4D1Z8 144 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 SRIP30626 198 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 TMEM78Q5T7P6 136 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 Q8TAT8 98 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 TMEM263Q8WUH6 116 aaKnown RBP7.95□□□□□ -1.14
CTSB-214ENST00000527243 C16orf74Q96GX8 76 aa7.95□□□□□ -1.14
CTSB-214ENST00000527243 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms