RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 FAM30AQ9NZY2 134 aa12.51□□□□□ -0.41
CAPN1-206ENST00000526966 HSD17B11Q8NBQ5 300 aa12.5□□□□□ -0.41
CAPN1-206ENST00000526966 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
CAPN1-206ENST00000526966 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
CAPN1-206ENST00000526966 LOC105371267A0A1B0GV96 52 aa12.49□□□□□ -0.41
CAPN1-206ENST00000526966 TAS2R45P59539 299 aa12.49□□□□□ -0.41
CAPN1-206ENST00000526966 SERF2P84101 59 aa12.49□□□□□ -0.41
CAPN1-206ENST00000526966 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
CAPN1-206ENST00000526966 OR2G3Q8NGZ4 309 aa12.49□□□□□ -0.41
CAPN1-206ENST00000526966 TRAV8-6A0A0B4J262 113 aa12.48□□□□□ -0.41
CAPN1-206ENST00000526966 FBLL1A6NHQ2 334 aaKnown RBP12.48□□□□□ -0.41
CAPN1-206ENST00000526966 PFN1P07737 140 aaKnown RBP12.48□□□□□ -0.41
CAPN1-206ENST00000526966 ARL6IP6Q8N6S5 226 aa12.48□□□□□ -0.41
CAPN1-206ENST00000526966 SLC25A29Q8N8R3 303 aa12.48□□□□□ -0.41
CAPN1-206ENST00000526966 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
CAPN1-206ENST00000526966 Q9HAA7 133 aa12.48□□□□□ -0.41
CAPN1-206ENST00000526966 SDF2L1Q9HCN8 221 aa12.48□□□□□ -0.41
CAPN1-206ENST00000526966 F6UZH7 168 aa12.47□□□□□ -0.41
CAPN1-206ENST00000526966 BLOC1S1P78537 153 aa12.47□□□□□ -0.41
CAPN1-206ENST00000526966 CMTM2Q8TAZ6 248 aa12.47□□□□□ -0.41
CAPN1-206ENST00000526966 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
CAPN1-206ENST00000526966 SH3BGRL3Q9H299 93 aa12.47□□□□□ -0.41
CAPN1-206ENST00000526966 TRBV6-4A0A1B0GX49 114 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 PGPA6NDG6 321 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 CIDEAO60543 219 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 LAGE3Q14657 143 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 RHOHQ15669 191 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 OR10J3Q5JRS4 329 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 LELP1Q5T871 98 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 Q6ZSA8 131 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 SVBPQ8N300 66 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 TREM1Q9NP99 234 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 RPH3ALQ9UNE2 315 aa12.46□□□□□ -0.41
CAPN1-206ENST00000526966 TRAV8-1A0A0A6YYK1 113 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 J3QL48 77 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 RS1O15537 224 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 EIF3GO75821 320 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN1-206ENST00000526966 SCO1O75880 301 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-206ENST00000526966 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 DPPA3Q6W0C5 159 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 PRADC1Q9BSG0 188 aa12.45□□□□□ -0.42
CAPN1-206ENST00000526966 CARHSP1Q9Y2V2 147 aaKnown RBP12.45□□□□□ -0.42
CAPN1-206ENST00000526966 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 IGHV3-33P01772 117 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 MBP02144 154 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 IGHV3-30-3P0DP02 117 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 ZNF876PQ49A33 203 aa12.44□□□□□ -0.42
CAPN1-206ENST00000526966 APOC3P02656 99 aa12.43□□□□□ -0.42
CAPN1-206ENST00000526966 SULT1A2P50226 295 aa12.43□□□□□ -0.42
CAPN1-206ENST00000526966 RAB5CP51148 216 aa12.43□□□□□ -0.42
CAPN1-206ENST00000526966 WFDC2Q14508 124 aa12.43□□□□□ -0.42
CAPN1-206ENST00000526966 PQLC2Q6ZP29 291 aa12.43□□□□□ -0.42
CAPN1-206ENST00000526966 GTSF1LQ9H1H1 148 aa12.43□□□□□ -0.42
CAPN1-206ENST00000526966 KRTAP29-1A8MX34 341 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-206ENST00000526966 PLA2G1BP04054 148 aaKnown RBP12.42□□□□□ -0.42
CAPN1-206ENST00000526966 RAB2AP61019 212 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 GNG5P63218 68 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-206ENST00000526966 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
CAPN1-206ENST00000526966 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
CAPN1-206ENST00000526966 PTH2Q96A98 100 aa12.41□□□□□ -0.42
CAPN1-206ENST00000526966 IGHV3-73A0A0B4J1V6 119 aa12.4□□□□□ -0.42
CAPN1-206ENST00000526966 A0A1W2PPV4 95 aa12.4□□□□□ -0.42
CAPN1-206ENST00000526966 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
CAPN1-206ENST00000526966 SNAPINO95295 136 aa12.4□□□□□ -0.42
CAPN1-206ENST00000526966 MGST1P10620 155 aaKnown RBP12.4□□□□□ -0.42
CAPN1-206ENST00000526966 ZNF80P51504 273 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-206ENST00000526966 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.42
CAPN1-206ENST00000526966 LINC00528Q8N1L1 170 aa12.4□□□□□ -0.42
CAPN1-206ENST00000526966 LRP1Q07954 4544 aaKnown RBP12.4□□□□□ -0.42
CAPN1-206ENST00000526966 SERTM2A0A1B0GWG4 89 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 Q8N3U1 123 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 CLRN3Q8NCR9 226 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 NDFIP1Q9BT67 221 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 HMCN2Q8NDA2 5059 aa12.39□□□□□ -0.43
CAPN1-206ENST00000526966 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
CAPN1-206ENST00000526966 H2AFB1P0C5Y9 115 aa12.38□□□□□ -0.43
CAPN1-206ENST00000526966 CDC34P49427 236 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-206ENST00000526966 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-206ENST00000526966 SGK494Q96LW2 274 aa12.38□□□□□ -0.43
CAPN1-206ENST00000526966 ACTR3CQ9C0K3 210 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-206ENST00000526966 TRAV8-3A0A0A6YYJ7 113 aa12.37□□□□□ -0.43
CAPN1-206ENST00000526966 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
CAPN1-206ENST00000526966 TMEM75Q8N9X5 138 aa12.37□□□□□ -0.43
CAPN1-206ENST00000526966 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms