RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 MED14OSP0DP75 135 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 RIGQ13278 110 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 ZNF575Q86XF7 245 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 FAM210BQ96KR6 192 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 A0A1B0GUT8 65 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 COLCA2A8K830 154 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 H3BVH4 76 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 SPINK4O60575 86 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 CTRLP40313 264 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 CACNG7P62955 275 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 CSNK1G2-AS1Q8NCQ2 148 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 TP53TG3Q9ULZ0 132 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 TIMM8BQ9Y5J9 83 aaPredicted RBP9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 RYR2Q92736 4967 aa9.18□□□□□ -0.94
SSSCA1-203ENST00000526877 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 A0A1B0GW15 77 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 SNAI2O43623 268 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 S100A8P05109 93 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 COX19Q49B96 90 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 MRPL54Q6P161 138 aaKnown RBP9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 WDR73Q6P4I2 378 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 SSBP4Q9BWG4 385 aaPredicted RBP9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 PHLDA3Q9Y5J5 127 aa9.17□□□□□ -0.94
SSSCA1-203ENST00000526877 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
SSSCA1-203ENST00000526877 SPANXN1Q5VSR9 72 aa9.16□□□□□ -0.94
SSSCA1-203ENST00000526877 ZNF705AQ6ZN79 300 aaPredicted RBP9.16□□□□□ -0.94
SSSCA1-203ENST00000526877 OVOL2Q9BRP0 275 aa9.16□□□□□ -0.94
SSSCA1-203ENST00000526877 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
SSSCA1-203ENST00000526877 RAB5AP20339 215 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 NTF3P20783 257 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 CAMPP49913 170 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 SSTP61278 116 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 HBBP68871 147 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 TWIST1Q15672 202 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 RRN3P1Q2M238 152 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 Q6ZWC4 215 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 SPXQ9BT56 116 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 SCRT2Q9NQ03 307 aa9.15□□□□□ -0.94
SSSCA1-203ENST00000526877 MUC21A0A0G2JKD1 596 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 MUC21A0A140T8X8 626 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 LCE6AA0A183 80 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 SMIM9A6NGZ8 99 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 RAB4BP61018 213 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 SMIM15Q7Z3B0 74 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 ZFP82Q8N141 532 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 SYT8Q8NBV8 401 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 OR10AG1Q8NH19 301 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 TMEM263Q8WUH6 116 aaKnown RBP9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 CNFNQ9BYD5 112 aa9.14□□□□□ -0.95
SSSCA1-203ENST00000526877 IGHV4-4A0A075B6R2 117 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 SNURFLB1AK76 121 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 MT-ND6P03923 174 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 PRM2P04554 102 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 AZU1P20160 251 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 DEFB135Q30KP9 77 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 MUC4Q99102 2169 aa9.13□□□□□ -0.95
SSSCA1-203ENST00000526877 M0R2P5 195 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 M0R381 172 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 SPRY2O43597 315 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 RNF183Q96D59 192 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
SSSCA1-203ENST00000526877 ZNF876PQ49A33 203 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 OR11H2Q8NH07 326 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 IL17DQ8TAD2 202 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 RNASE8Q8TDE3 154 aaKnown RBP9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 PTH2Q96A98 100 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 X6R8D5 127 aa9.11□□□□□ -0.95
SSSCA1-203ENST00000526877 NXPH4O95158 308 aa9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 DMRTA1Q5VZB9 504 aa9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 GATD1Q8NB37 220 aa9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 FRZBQ92765 325 aa9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 TMEM191AQ9H0A3 160 aa9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 MSRB1Q9NZV6 116 aa9.1□□□□□ -0.95
SSSCA1-203ENST00000526877 APCSP02743 223 aa9.09□□□□□ -0.95
SSSCA1-203ENST00000526877 SMIM17P0DL12 118 aa9.09□□□□□ -0.95
SSSCA1-203ENST00000526877 MIFP14174 115 aa9.09□□□□□ -0.95
SSSCA1-203ENST00000526877 FABP9Q0Z7S8 132 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms