RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 COL11A1P12107 1806 aaPredicted RBP2.67□□□□□ -1.98
CTR9-203ENST00000526874 LRP5O75197 1615 aa2.67□□□□□ -1.98
CTR9-203ENST00000526874 SHANK1Q9Y566 2161 aa2.67□□□□□ -1.98
CTR9-203ENST00000526874 A0A0C4DFX4 3053 aa2.67□□□□□ -1.98
CTR9-203ENST00000526874 GPR179Q6PRD1 2367 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 IGLV4-60A0A075B6I1 120 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 IGKV1D-17A0A075B6S4 117 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 LINC00032P0C843 101 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 IL7P13232 177 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 COX7CP15954 63 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 C12orf73Q69YU5 71 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 LCN9Q8WX39 176 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 TIMM21Q9BVV7 248 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 ATG5Q9H1Y0 275 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 NPVFQ9HCQ7 196 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 ERICH3Q5RHP9 1530 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 FREM3P0C091 2139 aa2.66□□□□□ -1.98
CTR9-203ENST00000526874 SNRNP200O75643 2136 aaKnown RBP2.65□□□□□ -1.98
CTR9-203ENST00000526874 CLASP1Q7Z460 1538 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 KIAA0586Q9BVV6 1533 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 SLC25A6P12236 298 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 DCDP81605 110 aaKnown RBP2.65□□□□□ -1.99
CTR9-203ENST00000526874 Q0VG73 95 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 PDE6HQ13956 83 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 TMEM141Q96I45 108 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 AP4S1Q9Y587 144 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 C10orf71Q711Q0 1435 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 DIP2BQ9P265 1576 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 PLXNA2O75051 1894 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 PLXNA4Q9HCM2 1894 aa2.65□□□□□ -1.99
CTR9-203ENST00000526874 KIF21BO75037 1637 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 ABCA5Q8WWZ7 1642 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 UBE2L5PA0A1B0GUS4 154 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 GNGT2O14610 69 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 UBE2L3P68036 154 aaKnown RBP2.64□□□□□ -1.99
CTR9-203ENST00000526874 DEFB132Q7Z7B7 95 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 SPACA4Q8TDM5 124 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 LINC00474Q9P2X8 69 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 CPSF1Q10570 1443 aaKnown RBP2.64□□□□□ -1.99
CTR9-203ENST00000526874 ADAMTS12P58397 1594 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 IQSEC2Q5JU85 1478 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 FYCO1Q9BQS8 1478 aa2.64□□□□□ -1.99
CTR9-203ENST00000526874 KIAA1549LQ6ZVL6 1849 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 ABCA3Q99758 1704 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 A0A1W2PNN7 141 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 IGKCP01834 107 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 RHOHQ15669 191 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 KRTAP13-2Q52LG2 175 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 C1orf137Q5JT78 98 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
CTR9-203ENST00000526874 BIVM-ERCC5R4GMW8 1640 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 PLEKHH2Q8IVE3 1493 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 PKD1L2Q7Z442 2459 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 COL4A5P29400 1685 aa2.63□□□□□ -1.99
CTR9-203ENST00000526874 ANK1P16157 1881 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 MUC22E2RYF6 1773 aaPredicted RBP2.62□□□□□ -1.99
CTR9-203ENST00000526874 UACAQ9BZF9 1416 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 TNRC6AQ8NDV7 1962 aaKnown RBP2.62□□□□□ -1.99
CTR9-203ENST00000526874 H3BQ15 152 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 SSSCA1O60232 199 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 CCKP06307 115 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 CNBPP62633 177 aaKnown RBP2.62□□□□□ -1.99
CTR9-203ENST00000526874 IQCJQ1A5X6 159 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 KRTAP13-3Q3SY46 172 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 SLC48A1Q6P1K1 146 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 PRXQ9BXM0 1461 aa2.62□□□□□ -1.99
CTR9-203ENST00000526874 LAMB4A4D0S4 1761 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 PDE4DIPQ5VU43 2346 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 hADV29S1A0JD25 119 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 PCNX2A6NKB5 2137 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 MRPS14O60783 128 aaKnown RBP2.61□□□□□ -1.99
CTR9-203ENST00000526874 CBLN1P23435 193 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 POLR2JP52435 117 aaKnown RBP2.61□□□□□ -1.99
CTR9-203ENST00000526874 LINC00315P59091 139 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 IGFBP7Q16270 282 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 Q1T7F1 81 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
CTR9-203ENST00000526874 UNQ5815/PRO19632Q6UWF5 114 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 COMMD6Q7Z4G1 85 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 CMTM2Q8TAZ6 248 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 HEATR1Q9H583 2144 aaKnown RBP2.61□□□□□ -1.99
CTR9-203ENST00000526874 KDM5DQ9BY66 1539 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 ANKRD36BQ8N2N9 1353 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 NINQ8N4C6 2090 aa2.61□□□□□ -1.99
CTR9-203ENST00000526874 MADDQ8WXG6 1647 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 DOCK1Q14185 1865 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 SCAPERQ9BY12 1400 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 GOLGA3Q08378 1498 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 ABCC2Q92887 1545 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 DISP1Q96F81 1524 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 TRAV2A0A0B4J234 112 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 CXorf51AA0A1B0GTR3 108 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 ATP5EP56381 51 aaPredicted RBP2.6□□□□□ -1.99
CTR9-203ENST00000526874 FAM74A1Q5RGS3 127 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 LYPD1Q8N2G4 141 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms