RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PTRHD1Q6GMV3 140 aaKnown RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 DHRS4L2Q6PKH6 230 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM229BQ8NBD8 167 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 OR4B1Q8NGF8 309 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 OR5A2Q8NGI9 324 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 OR5AK2Q8NH90 309 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 SMIM11BQ8TCY0 68 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 BORCS8Q96FH0 119 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 MCEEQ96PE7 176 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 PAIP2Q9BPZ3 127 aaKnown RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 C9orf16Q9BUW7 83 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 CNFNQ9BYD5 112 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 ENY2Q9NPA8 101 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 SS18L2Q9UHA2 77 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 PYCARDQ9ULZ3 195 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 FAM32AQ9Y421 112 aaKnown RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 KNL1Q8NG31 2342 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 DNAH11Q96DT5 4516 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 ITPR3Q14573 2671 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 ARHGAP31Q2M1Z3 1444 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 TRBV10-1A0A0K0K1A3 114 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 A0A1B0GW64 132 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 TRDV1A0A1B0GX56 115 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 SMIM23A6NLE4 172 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 IFITM5A6NNB3 132 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 C9JAW5 83 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 F2Z2F3 143 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 G3V2T6 193 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 G3V318 75 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 H7C1C5 153 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 AIPO00170 330 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 KPNA4O00629 521 aaPredicted RBP-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 MFSD11O43934 449 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 EDF1O60869 148 aaKnown RBP-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 ATP5HO75947 161 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 NDUFC2O95298 119 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 OR2H2O95918 312 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 MT-ND6P03923 174 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 CCKP06307 115 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 IL7P13232 177 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 GLRXP35754 106 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 CDKN2CP42773 168 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 CAPZBP47756 277 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 CEBPGP53567 150 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 NDUFA6P56556 154 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 MAXP61244 160 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 LCN6P62502 163 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 RHOHQ15669 191 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 LTC4SQ16873 150 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 RTL8BQ17RB0 113 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 SCGB2B2Q4G0G5 96 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 MORN4Q8NDC4 146 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 OR4S1Q8NGB4 309 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 OR8J3Q8NGG0 315 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 OR51A4Q8NGJ6 313 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 BTF3L4Q96K17 158 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 CFAP53Q96M91 514 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 PRELID3AQ96N28 172 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 GINS3Q9BRX5 216 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 ATG5Q9H1Y0 275 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 BIN3Q9NQY0 253 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 LYRM2Q9NU23 88 aaPredicted RBP-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 FKBP11Q9NYL4 201 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 LRP6O75581 1613 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 TACC2O95359 2948 aa-0.43□□□□□ -2.48
CSDE1-210ENST00000525878 MYO18BQ8IUG5 2567 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 EIF3AQ14152 1382 aaKnown RBP-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 LRRC37A2A6NM11 1700 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 HECTD1Q9ULT8 2610 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 APOBP04114 4563 aaKnown RBP-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 YTHDC2Q9H6S0 1430 aaKnown RBP-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 LRRC37A3O60309 1634 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 TRAV17A0A0B4J275 112 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 TRBV7-6A0A0J9YX20 115 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 TRBV27A0A0K0K1C4 114 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM189A5PLL7 270 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 BBIP1A8MTZ0 92 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 H3BQV1 296 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 GABARAPH6UMI1 98 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 M0R3E3 92 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 ATG12O94817 140 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 CFDP00746 253 aaPredicted RBP-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 APOA2P02652 100 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SLC25A4P12235 298 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 CCL3L1P16619 93 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 ADCYAP1P18509 176 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SPRR1AP35321 89 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SPAG11BQ08648 103 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SNCBQ16143 134 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 KRTAP6-2Q3LI66 62 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 OR2T2Q6IF00 324 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 Q6ZRX8 168 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SSBP3-AS1Q7Z2R9 100 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 IFT20Q8IY31 132 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 OR5H6Q8NGV6 325 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM141Q96I45 108 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 PARVGQ9HBI0 331 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 BET1LQ9NYM9 111 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 PRO0255Q9UI72 69 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 401.6 ms