RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PIK3CD-AS1Q5SR53 167 aa10.88□□□□□ -0.67
PVT1-220ENST00000524165 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
PVT1-220ENST00000524165 UBE2L5PA0A1B0GUS4 154 aa10.87□□□□□ -0.67
PVT1-220ENST00000524165 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
PVT1-220ENST00000524165 CST7O76096 145 aa10.87□□□□□ -0.67
PVT1-220ENST00000524165 ANGP03950 147 aaKnown RBP10.87□□□□□ -0.67
PVT1-220ENST00000524165 KRTAP26-1Q6PEX3 210 aa10.87□□□□□ -0.67
PVT1-220ENST00000524165 TREM1Q9NP99 234 aa10.87□□□□□ -0.67
PVT1-220ENST00000524165 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
PVT1-220ENST00000524165 UFSP1Q6NVU6 142 aa10.86□□□□□ -0.67
PVT1-220ENST00000524165 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
PVT1-220ENST00000524165 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
PVT1-220ENST00000524165 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
PVT1-220ENST00000524165 L7N2F9 121 aa10.85□□□□□ -0.67
PVT1-220ENST00000524165 RNASE3P12724 160 aaKnown RBP10.85□□□□□ -0.67
PVT1-220ENST00000524165 AP3S2P59780 193 aa10.85□□□□□ -0.67
PVT1-220ENST00000524165 VAMP2P63027 116 aa10.85□□□□□ -0.67
PVT1-220ENST00000524165 MPV17L2Q567V2 206 aa10.85□□□□□ -0.67
PVT1-220ENST00000524165 NAA50Q9GZZ1 169 aaKnown RBP10.85□□□□□ -0.67
PVT1-220ENST00000524165 C11orf21Q9P2W6 132 aa10.85□□□□□ -0.67
PVT1-220ENST00000524165 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
PVT1-220ENST00000524165 FGF7P21781 194 aa10.84□□□□□ -0.67
PVT1-220ENST00000524165 BCAP31P51572 246 aa10.84□□□□□ -0.67
PVT1-220ENST00000524165 FAM231BA6NCW3 169 aa10.83□□□□□ -0.68
PVT1-220ENST00000524165 H7C1H1 209 aa10.83□□□□□ -0.68
PVT1-220ENST00000524165 TCRBP04435 133 aa10.83□□□□□ -0.68
PVT1-220ENST00000524165 S100A11P31949 105 aa10.83□□□□□ -0.68
PVT1-220ENST00000524165 AP5S1Q9NUS5 200 aa10.83□□□□□ -0.68
PVT1-220ENST00000524165 PRR34Q9NV39 138 aa10.83□□□□□ -0.68
PVT1-220ENST00000524165 SLPIP03973 132 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 LGALSLQ3ZCW2 172 aaPredicted RBP10.82□□□□□ -0.68
PVT1-220ENST00000524165 SPANXN2Q5MJ10 180 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 TOMM5Q8N4H5 51 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 DEDD2Q8WXF8 326 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 HYLS1Q96M11 299 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 NPCDR1Q9BY65 106 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 NMES1Q9C002 83 aa10.82□□□□□ -0.68
PVT1-220ENST00000524165 TRBV6-8A0A0A6YYG3 113 aa10.81□□□□□ -0.68
PVT1-220ENST00000524165 RHODO00212 210 aa10.81□□□□□ -0.68
PVT1-220ENST00000524165 OR7C2O60412 319 aa10.81□□□□□ -0.68
PVT1-220ENST00000524165 CMTM2Q8TAZ6 248 aa10.81□□□□□ -0.68
PVT1-220ENST00000524165 TRIM63Q969Q1 353 aa10.81□□□□□ -0.68
PVT1-220ENST00000524165 SLIRPQ9GZT3 109 aaKnown RBP10.81□□□□□ -0.68
PVT1-220ENST00000524165 CRCT1Q9UGL9 99 aa10.81□□□□□ -0.68
PVT1-220ENST00000524165 FAM24AA6NFZ4 105 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 CCSO14618 274 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 SULT1A1P50225 295 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 PKIAP61925 76 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 ARL6IP6Q8N6S5 226 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 JPT2Q9H910 190 aa10.8□□□□□ -0.68
PVT1-220ENST00000524165 LYRM2Q9NU23 88 aaPredicted RBP10.8□□□□□ -0.68
PVT1-220ENST00000524165 FSIP2Q5CZC0 6907 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
PVT1-220ENST00000524165 UBE2D3P61077 147 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 UBE2D2P62837 147 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
PVT1-220ENST00000524165 HBG1P69891 147 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 HBG2P69892 147 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 ATP6V1FQ16864 119 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 MAJINQ3KP22 176 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 ZNF664Q8N3J9 261 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 TMEM75Q8N9X5 138 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 LYPD6BQ8NI32 183 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 BCL7BQ9BQE9 202 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 C11orf1Q9H5F2 150 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 OTORQ9NRC9 128 aa10.79□□□□□ -0.68
PVT1-220ENST00000524165 A0A087WWL8 130 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 MUC21A0A0G2JKD1 596 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 TRBV10-1A0A0K0K1A3 114 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 RPL36AP83881 106 aaKnown RBP10.78□□□□□ -0.68
PVT1-220ENST00000524165 FAM74A1Q5RGS3 127 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 STPG4Q8N801 248 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
PVT1-220ENST00000524165 NDFIP1Q9BT67 221 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
PVT1-220ENST00000524165 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
PVT1-220ENST00000524165 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.69
PVT1-220ENST00000524165 S100A10P60903 97 aa10.77□□□□□ -0.69
PVT1-220ENST00000524165 COX6A2Q02221 97 aa10.77□□□□□ -0.69
PVT1-220ENST00000524165 Q6ZRP5 223 aa10.77□□□□□ -0.69
PVT1-220ENST00000524165 OR5AC2Q9NZP5 309 aa10.77□□□□□ -0.69
PVT1-220ENST00000524165 TRAV26-2A0A0B4J265 109 aa10.76□□□□□ -0.69
PVT1-220ENST00000524165 NDUFS6O75380 124 aaKnown RBP10.76□□□□□ -0.69
PVT1-220ENST00000524165 ATP6V1G2O95670 118 aa10.76□□□□□ -0.69
PVT1-220ENST00000524165 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
PVT1-220ENST00000524165 STX12Q86Y82 276 aa10.76□□□□□ -0.69
PVT1-220ENST00000524165 GCGP01275 180 aa10.75□□□□□ -0.69
PVT1-220ENST00000524165 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
PVT1-220ENST00000524165 LINC00269Q8N2A0 174 aa10.75□□□□□ -0.69
PVT1-220ENST00000524165 TMEM252Q8N6L7 170 aa10.75□□□□□ -0.69
PVT1-220ENST00000524165 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
PVT1-220ENST00000524165 IGKV2-24A0A0C4DH68 120 aa10.74□□□□□ -0.69
PVT1-220ENST00000524165 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
PVT1-220ENST00000524165 PTTG1O95997 202 aa10.74□□□□□ -0.69
PVT1-220ENST00000524165 PVALBP20472 110 aaPredicted RBP10.74□□□□□ -0.69
PVT1-220ENST00000524165 S100A4P26447 101 aaKnown RBP10.74□□□□□ -0.69
PVT1-220ENST00000524165 CHCHD5Q9BSY4 110 aa10.74□□□□□ -0.69
PVT1-220ENST00000524165 NDUFB6O95139 128 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 IFNA7P01567 189 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms