RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 NRACQ8N912 160 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 Q8N976 141 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 HYLS1Q96M11 299 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 NPCDR1Q9BY65 106 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 NMES1Q9C002 83 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 SLIRPQ9GZT3 109 aaKnown RBP4.14□□□□□ -1.75
PABPC1-220ENST00000522658 FLVCR2Q9UPI3 526 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 LENEPQ9Y5L5 61 aa4.14□□□□□ -1.75
PABPC1-220ENST00000522658 FAT1Q14517 4588 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 TRAV8-1A0A0A6YYK1 113 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 IGHV3-73A0A0B4J1V6 119 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 FAM24AA6NFZ4 105 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 F6UZH7 168 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 H3BMQ9 156 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 NDUFB4O95168 129 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 MGST1P10620 155 aaKnown RBP4.13□□□□□ -1.75
PABPC1-220ENST00000522658 RANP62826 216 aaKnown RBP4.13□□□□□ -1.75
PABPC1-220ENST00000522658 ZNF876PQ49A33 203 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 Q6AWC8 147 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 THAP6Q8TBB0 222 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 MITD1Q8WV92 249 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 ASB13Q8WXK3 278 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 PHYHIPLQ96FC7 376 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 C2orf50Q96LR7 162 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 SLC25A2Q9BXI2 301 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 GTSF1LQ9H1H1 148 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 DPH3P1Q9H4G8 78 aa4.13□□□□□ -1.75
PABPC1-220ENST00000522658 LYRM2Q9NU23 88 aaPredicted RBP4.13□□□□□ -1.75
PABPC1-220ENST00000522658 A0A087WWC5 75 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 A0A087WX48 190 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 K7EQM0 130 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 IGLV2-8P01709 118 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 CRPP02741 224 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 NPSP0C0P6 89 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 S100A4P26447 101 aaKnown RBP4.12□□□□□ -1.75
PABPC1-220ENST00000522658 ELOBQ15370 118 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 FFAR4Q5NUL3 377 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 Q6ZSA8 131 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 MIR17HGQ75NE6 70 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 SLC25A29Q8N8R3 303 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 PRSS3P2Q8NHM4 247 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 CHAC1Q9BUX1 264 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 TREM1Q9NP99 234 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 V9GYH0 126 aa4.12□□□□□ -1.75
PABPC1-220ENST00000522658 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
PABPC1-220ENST00000522658 TRBV6-4A0A1B0GX49 114 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 IGSF23A1L1A6 192 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 PGPA6NDG6 321 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 GAGE12JA6NER3 117 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 TYMSP04818 313 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 FGF8P55075 233 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-220ENST00000522658 GAGE1Q13065 139 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 GAGE4Q13068 117 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 GAGE5Q13069 117 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 GCSAMLQ5JQS6 135 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 Q6ZQT7 251 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 GOLT1AQ6ZVE7 132 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 TMEM252Q8N6L7 170 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-220ENST00000522658 HSD17B11Q8NBQ5 300 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 OR5C1Q8NGR4 320 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 TMED6Q8WW62 240 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 BAALCQ8WXS3 180 aa4.11□□□□□ -1.75
PABPC1-220ENST00000522658 DAZAP1Q96EP5 407 aaKnown RBP4.11□□□□□ -1.75
PABPC1-220ENST00000522658 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 TRAV6A0A075B6T7 132 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 A0A1W2PPV4 95 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 GNRH2O43555 120 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 Q0VG73 95 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 RAB32Q13637 225 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 ODF1Q14990 250 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 LGALSLQ3ZCW2 172 aaPredicted RBP4.1□□□□□ -1.75
PABPC1-220ENST00000522658 LINC01620Q4KN68 170 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 CFAP126Q5VTH2 177 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 DAZ4Q86SG3 579 aaKnown RBP4.1□□□□□ -1.75
PABPC1-220ENST00000522658 OR10G9Q8NGN4 311 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 SCGB1C1Q8TD33 95 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 UBE2WQ96B02 151 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 FXYD5Q96DB9 178 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 DAZ3Q9NR90 486 aaKnown RBP4.1□□□□□ -1.75
PABPC1-220ENST00000522658 OTORQ9NRC9 128 aa4.1□□□□□ -1.75
PABPC1-220ENST00000522658 SERTM2A0A1B0GWG4 89 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 A8MWV9 139 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 TAAR5O14804 337 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 HLA-DQA1P01909 254 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 PET100P0DJ07 73 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 WFDC2Q14508 124 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 LRRC37A5PQ49AS3 106 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 ZNF506Q5JVG8 444 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 C10orf25Q5T742 122 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 CYB561D1Q8N8Q1 229 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 CIRBP-AS1Q8TBR5 109 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 ZC2HC1AQ96GY0 325 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 FAM167A-AS1Q96KT0 104 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 SEC22CQ9BRL7 303 aa4.09□□□□□ -1.75
PABPC1-220ENST00000522658 NUDT15Q9NV35 164 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms