RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TRGV1A0A0A0MS02 117 aa17.21■□□□□ 0.35
PVT1-212ENST00000521951 SNAI2O43623 268 aa17.21■□□□□ 0.35
PVT1-212ENST00000521951 MT-ND4LP03901 98 aa17.21■□□□□ 0.35
PVT1-212ENST00000521951 FER1L6-AS1Q8NA97 138 aa17.21■□□□□ 0.35
PVT1-212ENST00000521951 TSKUQ8WUA8 353 aa17.21■□□□□ 0.35
PVT1-212ENST00000521951 MRPL16Q9NX20 251 aaKnown RBP17.21■□□□□ 0.35
PVT1-212ENST00000521951 PPP1R2P9O14990 202 aa17.21■□□□□ 0.34
PVT1-212ENST00000521951 OR5AL1P0C617 328 aa17.21■□□□□ 0.34
PVT1-212ENST00000521951 LGALS9BQ3B8N2 356 aa17.21■□□□□ 0.34
PVT1-212ENST00000521951 GTSF1Q8WW33 167 aa17.21■□□□□ 0.34
PVT1-212ENST00000521951 TEX48A0A1B0GUV7 120 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 LINC00612Q8N6U2 182 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 CLRN3Q8NCR9 226 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 C11orf45Q8TAV5 145 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 ANAPC16Q96DE5 110 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 TPPP3Q9BW30 176 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 PHLDA3Q9Y5J5 127 aa17.2■□□□□ 0.34
PVT1-212ENST00000521951 A0A1W2PPQ1 181 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 GAGE12BA1L429 117 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 GAGE7O76087 117 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 GAGE12FP0CL80 117 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 GAGE12GP0CL81 117 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 GAGE12IP0CL82 117 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 DEFB130BP0DP73 79 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 DEFB130AP0DP74 79 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 RASL10AQ92737 203 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 PTH2Q96A98 100 aa17.19■□□□□ 0.34
PVT1-212ENST00000521951 MUC21A0A0G2JKD1 596 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 MUC21A0A140T8X8 626 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 C12orf74Q32Q52 190 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 ZNF876PQ49A33 203 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 LYZL1Q6UWQ5 148 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 OR10AG1Q8NH19 301 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 GFRA4Q9GZZ7 299 aa17.18■□□□□ 0.34
PVT1-212ENST00000521951 FAM231BA6NCW3 169 aa17.17■□□□□ 0.34
PVT1-212ENST00000521951 FOXA3P55318 350 aaPredicted RBP17.17■□□□□ 0.34
PVT1-212ENST00000521951 DAD1P61803 113 aa17.17■□□□□ 0.34
PVT1-212ENST00000521951 C7orf77A4D0Y5 90 aa17.16■□□□□ 0.34
PVT1-212ENST00000521951 F2Z2F3 143 aa17.16■□□□□ 0.34
PVT1-212ENST00000521951 NANOS2P60321 138 aaKnown RBP17.16■□□□□ 0.34
PVT1-212ENST00000521951 DMRTA1Q5VZB9 504 aa17.16■□□□□ 0.34
PVT1-212ENST00000521951 SVBPQ8N300 66 aa17.16■□□□□ 0.34
PVT1-212ENST00000521951 CTRLP40313 264 aa17.16■□□□□ 0.34
PVT1-212ENST00000521951 SMIM27A0A1W2PRY6 76 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 HIGD1CA8MV81 97 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 M0R381 172 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 SSTP61278 116 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 ZFP82Q8N141 532 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 SYT8Q8NBV8 401 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 PGLYRP4Q96LB8 373 aa17.15■□□□□ 0.34
PVT1-212ENST00000521951 SNAPINO95295 136 aa17.14■□□□□ 0.33
PVT1-212ENST00000521951 RHEBQ15382 184 aa17.14■□□□□ 0.33
PVT1-212ENST00000521951 SPANXN1Q5VSR9 72 aa17.14■□□□□ 0.33
PVT1-212ENST00000521951 CTDSP1Q9GZU7 261 aa17.14■□□□□ 0.33
PVT1-212ENST00000521951 TRGV2A0A075B6R0 118 aa17.13■□□□□ 0.33
PVT1-212ENST00000521951 NXPH4O95158 308 aa17.13■□□□□ 0.33
PVT1-212ENST00000521951 PIK3CD-AS1Q5SR53 167 aa17.13■□□□□ 0.33
PVT1-212ENST00000521951 CACNG7P62955 275 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 WDR73Q6P4I2 378 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 NUP35Q8NFH5 326 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 C18orf15Q96N68 181 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 NDUFAF3Q9BU61 184 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 RPS10P5Q9NQ39 176 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 NAT8BQ9UHF3 227 aa17.12■□□□□ 0.33
PVT1-212ENST00000521951 Q6ZTC4 211 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 CNFNQ9BYD5 112 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 NACAE9PAV3 2078 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 IGHV4-4A0A075B6R2 117 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 A0A087WWC5 75 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 POM121L12Q8N7R1 296 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 JPT2Q9H910 190 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 MSRB1Q9NZV6 116 aa17.11■□□□□ 0.33
PVT1-212ENST00000521951 NTF3P20783 257 aa17.1■□□□□ 0.33
PVT1-212ENST00000521951 RS1O15537 224 aa17.09■□□□□ 0.33
PVT1-212ENST00000521951 TMEM242Q9NWH2 141 aa17.09■□□□□ 0.33
PVT1-212ENST00000521951 TRAV4A0A0B4J268 109 aa17.08■□□□□ 0.32
PVT1-212ENST00000521951 IGHV3-53P01767 116 aa17.08■□□□□ 0.32
PVT1-212ENST00000521951 FAM3BP58499 235 aaPredicted RBP17.08■□□□□ 0.32
PVT1-212ENST00000521951 CFAP126Q5VTH2 177 aa17.08■□□□□ 0.32
PVT1-212ENST00000521951 OR4C5Q8NGB2 326 aa17.08■□□□□ 0.32
PVT1-212ENST00000521951 A0A1B0GUT8 65 aa17.07■□□□□ 0.32
PVT1-212ENST00000521951 A8MWV9 139 aa17.07■□□□□ 0.32
PVT1-212ENST00000521951 ATP5G1P05496 136 aa17.07■□□□□ 0.32
PVT1-212ENST00000521951 ATRAIDQ6UW56 229 aa17.07■□□□□ 0.32
PVT1-212ENST00000521951 BORCS7Q96B45 105 aa17.07■□□□□ 0.32
PVT1-212ENST00000521951 ZNF479Q96JC4 524 aa17.07■□□□□ 0.32
PVT1-212ENST00000521951 TWIST1Q15672 202 aa17.06■□□□□ 0.32
PVT1-212ENST00000521951 IMMP2LQ96T52 175 aa17.06■□□□□ 0.32
PVT1-212ENST00000521951 SAMD10Q9BYL1 202 aa17.06■□□□□ 0.32
PVT1-212ENST00000521951 HTN3P15516 51 aa17.06■□□□□ 0.32
PVT1-212ENST00000521951 WWC2-AS2Q96NR7 200 aa17.06■□□□□ 0.32
PVT1-212ENST00000521951 DNAH7Q8WXX0 4024 aa17.04■□□□□ 0.32
PVT1-212ENST00000521951 CRYGDP07320 174 aa17.04■□□□□ 0.32
PVT1-212ENST00000521951 A0A087WWL8 130 aa17.03■□□□□ 0.32
PVT1-212ENST00000521951 TRAV10A0A0B4J240 114 aa17.03■□□□□ 0.32
PVT1-212ENST00000521951 RIGQ13278 110 aa17.03■□□□□ 0.32
PVT1-212ENST00000521951 PHLDA1Q8WV24 401 aaPredicted RBP17.03■□□□□ 0.32
PVT1-212ENST00000521951 AP1S3Q96PC3 154 aa17.03■□□□□ 0.32
PVT1-212ENST00000521951 DEFB131BA0A096LNP1 70 aa17.02■□□□□ 0.32
PVT1-212ENST00000521951 TRGC1P0CF51 173 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms