RNA–Protein interactions for RNA: ENST00000520808.6

NPIPB4-205, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 4

Gene NPIPB4, Length 560 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-205	ENST00000520808		Q8TAT8	98 aa		4.23	□□□□□ -1.73
NPIPB4-205	ENST00000520808	AGPAT4-IT1	Q9H0P7	198 aa		4.23	□□□□□ -1.73
NPIPB4-205	ENST00000520808	ST20	Q9HBF5	79 aa		4.23	□□□□□ -1.73
NPIPB4-205	ENST00000520808	DAZ1	Q9NQZ3	744 aa	Known RBP	4.23	□□□□□ -1.73
NPIPB4-205	ENST00000520808	TENM1	Q9UKZ4	2725 aa		4.23	□□□□□ -1.73
NPIPB4-205	ENST00000520808	IGHV3OR16-13	A0A075B7E8	117 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	IGHV3-74	A0A0B4J1X5	117 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	IGHV7-4-1	A0A0J9YVY3	117 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	TMEM213	A2RRL7	107 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	OR4C46	A6NHA9	309 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	PRAC2	D3DTV9	90 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	ZNF207	O43670	478 aa	Known RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	CSN3	P07498	182 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	ZNF80	P51504	273 aa	Predicted RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	HNRNPA3	P51991	378 aa	Known RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	NUTF2	P61970	127 aa	Known RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	FHL2	Q14192	279 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	TDRG1	Q3Y452	100 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	PSMG4	Q5JS54	123 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808		Q6ZN92	141 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	SPATA12	Q7Z6I5	190 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	GPHB5	Q86YW7	130 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	AMN1	Q8IY45	258 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	RNF182	Q8N6D2	247 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	SNHG12	Q9BXW3	62 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	MS4A6A	Q9H2W1	248 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	MAP1LC3A	Q9H492	121 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	NXT2	Q9NPJ8	142 aa	Known RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	PEF1	Q9UBV8	284 aa	Known RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	LINC00527	Q9UJ94	153 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	UFC1	Q9Y3C8	167 aa		4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	MRPS16	Q9Y3D3	137 aa	Known RBP	4.22	□□□□□ -1.73
NPIPB4-205	ENST00000520808	IGHV4-4	A0A075B6R2	117 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	IGHV3-49	A0A0A0MS15	119 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	TRAV21	A0A0B4J279	112 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808		A0A1B0GV90	55 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	HOXA3	O43365	443 aa	Predicted RBP	4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	IGHV3-11	P01762	117 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	HBD	P02042	147 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	ELANE	P08246	267 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	BLCAP	P62952	87 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	CFHR3	Q02985	330 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	DEFB112	Q30KQ8	113 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	MRPL51	Q4U2R6	128 aa	Known RBP	4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	PMCHL2	Q9BQD1	86 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	RHPN1-AS1	Q9BWJ2	59 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	SIGLEC8	Q9NYZ4	499 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	SMPX	Q9UHP9	88 aa		4.21	□□□□□ -1.74
NPIPB4-205	ENST00000520808	IGKV3D-20	A0A0C4DH25	116 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LOC389332	A0A1B0GUA5	103 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LINC01546	A6NGU7	62 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	SOCS3	O14543	225 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	SNAI2	O43623	268 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	TRBV12-3	P01733	135 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	IGLL1	P15814	213 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	PSMB8	P28062	276 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	IFI27	P40305	119 aa	Predicted RBP	4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	COL5A1-AS1	Q5SY13	56 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	SPANXN1	Q5VSR9	72 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LINC01545	Q5VT33	79 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	UNQ9165/PRO28630	Q6UXU0	137 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LINC00469	Q8N7U9	141 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	OR8A1	Q8NGG7	326 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	MRAP	Q8TCY5	172 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	DPF1	Q92782	380 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	KLK15	Q9H2R5	256 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	VPREB3	Q9UKI3	123 aa		4.2	□□□□□ -1.74
NPIPB4-205	ENST00000520808	PRSS47	A8MTI9	375 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	TCAP	O15273	167 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	NDUFA7	O95182	113 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	TNFRSF6B	O95407	300 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	PPP1R17	O96001	155 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	NPY	P01303	97 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	IGHV4-59	P01825	116 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	PRB4	P10163	310 aa	Predicted RBP	4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	S100A4	P26447	101 aa	Known RBP	4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	FCER1G	P30273	86 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	TSPO	P30536	169 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	ASIP	P42127	132 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LGALS9B	Q3B8N2	356 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LGALS9C	Q6DKI2	356 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	SLC25A34	Q6PIV7	304 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808		Q6YL49	198 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	APRG1	Q8IVJ8	170 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	ATOH7	Q8N100	152 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	DEFB125	Q8N687	156 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	OR1N2	Q8NGR9	330 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	MRAP2	Q96G30	205 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	RNF185	Q96GF1	192 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	RAX2	Q96IS3	184 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	CITED1	Q99966	193 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	WNK1	Q9H4A3	2382 aa		4.19	□□□□□ -1.74
NPIPB4-205	ENST00000520808	MUC21	A0A0G2JKD1	596 aa		4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808	MUC21	A0A140T8X8	626 aa		4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LINC01549	A6NIU2	74 aa		4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808		K7EMI3	77 aa		4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LGALS9	O00182	355 aa		4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808	ATP5L	O75964	103 aa		4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LGALS1	P09382	135 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB4-205	ENST00000520808	LEP	P41159	167 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms