RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MYOFQ9NZM1 2061 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 LRP4O75096 1905 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 ALPK2Q86TB3 2170 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 SPAG17Q6Q759 2223 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 DYSFO75923 2080 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGHV1-45A0A0A0MS14 117 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 A0A0J9YXY3 114 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 DNAJC9-AS1A6NH13 148 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 CGB1A6NKQ9 187 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 H3BTX0 84 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 TIMM17BO60830 172 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 SNRNP200O75643 2136 aaKnown RBP3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 CLPSP04118 112 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 CD52P31358 61 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 XCL1P47992 114 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 PROK1P58294 105 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 RPS21P63220 83 aaKnown RBP3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 RBM3P98179 157 aaKnown RBP3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 ERCC8Q13216 396 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 DAZAP2Q15038 168 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 C9orf139Q6ZV77 190 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 FLVCR1-AS1Q8TAF5 88 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 XCL2Q9UBD3 114 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 RNF7Q9UBF6 113 aa3.63□□□□□ -1.83
HMGB1P19-201ENST00000517578 TET1Q8NFU7 2136 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 EML6Q6ZMW3 1958 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGLV2-18A0A075B6J9 118 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 SS18L1O75177 396 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 CCKP06307 115 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 BRWD1-AS2P59051 145 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 PMS2CLQ68D20 193 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 SUMO4Q6EEV6 95 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 DAZ4Q86SG3 579 aaKnown RBP3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 DYNAPQ8N1N2 210 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 FGFBP3Q8TAT2 258 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 DAZ3Q9NR90 486 aaKnown RBP3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 CEP192Q8TEP8 1941 aa3.62□□□□□ -1.83
HMGB1P19-201ENST00000517578 TRAV8-3A0A0A6YYJ7 113 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 C12orf77C9JDV5 145 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 H7C2G1 150 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 M0R381 172 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 UBE2L6O14933 153 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 BAALC-AS2P0C853 105 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF32P17041 273 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 MAGEA5P43359 124 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 CIRBPQ14011 172 aaKnown RBP3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 C11orf44Q8N8P7 122 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF524Q96C55 264 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 RNF185Q96GF1 192 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 DEFB127Q9H1M4 99 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF71Q9NQZ8 489 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 MOB4Q9Y3A3 225 aa3.61□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGHV4-4A0A075B6R2 117 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGKV1OR2-108A0A075B7D4 117 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 TRBV27A0A0K0K1C4 114 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 H7BZZ5 65 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 COX7A2LO14548 114 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 SH2D1AO60880 128 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 FSTL3O95633 263 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGHV3-13P01766 116 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 SAA4P35542 130 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF80P51504 273 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 FXYD7P58549 80 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 DAD1P61803 113 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 SNRPD3P62318 126 aaKnown RBP3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 PATE2Q6UY27 113 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 C16orf47Q6ZP98 133 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 CD177Q8N6Q3 437 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 IMMP1LQ96LU5 166 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 DEFB118Q96PH6 123 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 C11orf68Q9H3H3 251 aaKnown RBP3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 UBE2D4Q9Y2X8 147 aa3.6□□□□□ -1.83
HMGB1P19-201ENST00000517578 CACNA1IQ9P0X4 2223 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 COL4A6Q14031 1691 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 TNRC6BQ9UPQ9 1833 aaKnown RBP3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGKV3D-11A0A0A0MRZ8 115 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 IBA57-AS1B1ANH7 110 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 SOCS3O14543 225 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGHV4-34P06331 123 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 PRSS2P07478 247 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 UBE2E1P51965 193 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 TFF2Q03403 129 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 C2orf66Q6UXQ4 117 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 C20orf197Q8N268 126 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 SMCR5Q8TEV8 140 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 Q9UF83 564 aa3.59□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGHV1OR21-1A0A087WYE8 117 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 SMKR1H3BMG3 65 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 I3L3M4 83 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 SUMO2P61956 95 aaKnown RBP3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 BLCAPP62952 87 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms