RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 C3orf62Q6ZUJ4 267 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 C15orf53Q8NAA6 179 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 TMEM106BQ9NUM4 274 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 KLK9Q9UKQ9 250 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 SERP1Q9Y6X1 66 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 VPS8Q8N3P4 1428 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 SPHKAPQ2M3C7 1700 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 CACNA1GO43497 2377 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 CC2D2AQ9P2K1 1620 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 TRAV17A0A0B4J275 112 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 MCRIP1C9JLW8 97 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 KLF7O75840 302 aaPredicted RBP1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 TNFP01375 233 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 IL5P05113 134 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 KRTAP10-1P60331 282 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 Q56UQ5 140 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 Q6AWC8 147 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 VWDEQ8N2E2 1590 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 LSM10Q969L4 123 aaKnown RBP1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 SPTSSAQ969W0 71 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 TMEM242Q9NWH2 141 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 CNTLNQ9NXG0 1405 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 NRXN2Q9P2S2 1712 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 TET3O43151 1660 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 RREB1Q92766 1687 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 MAPKBP1O60336 1514 aa1.19□□□□□ -2.22
SCARNA3-201ENST00000517097 PTPRMP28827 1452 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 ARAP2Q8WZ64 1704 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 TNS1Q9HBL0 1735 aaKnown RBP1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 TRGV2A0A075B6R0 118 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 TRAV2A0A0B4J234 112 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 TMEM30CPA0ZSE6 113 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 GEMIN2O14893 280 aaKnown RBP1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 NUPR1O60356 82 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 NDUFB6O95139 128 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 S100A8P05109 93 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 PIRTP0C851 137 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 PRB4P10163 310 aaPredicted RBP1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 IL7P13232 177 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 POLR2JP52435 117 aaKnown RBP1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 DEFB103AP81534 67 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 CATR1Q13166 79 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 RHOHQ15669 191 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 KRTAP13-4Q3LI77 160 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 SPANXN1Q5VSR9 72 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 MRPL54Q6P161 138 aaKnown RBP1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 Q6ZS92 163 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 PLPP5Q8NEB5 264 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 LCE3DQ9BYE3 92 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 RPRMQ9NS64 109 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 IER3IP1Q9Y5U9 82 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 KTN1Q86UP2 1357 aaKnown RBP1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 SHROOM2Q13796 1616 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 CHD1O14646 1710 aa1.18□□□□□ -2.22
SCARNA3-201ENST00000517097 NCOA6Q14686 2063 aaPredicted RBP1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 APOC4-APOC2K7ER74 178 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 CCL25O15444 150 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 IGKCP01834 107 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 APOC2P02655 101 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 PIPP12273 146 aaPredicted RBP1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 KRTAP10-10P60014 251 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 HSD52Q0P140 79 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 MPV17LQ2QL34 196 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 CSAG1Q6PB30 78 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 UNQ5815/PRO19632Q6UWF5 114 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 GTF2H5Q6ZYL4 71 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 PPDPFLQ8WWR9 84 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 ZNF625Q96I27 306 aaPredicted RBP1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 MRPL57Q9BQC6 102 aaKnown RBP1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 LIMD2Q9BT23 127 aa1.17□□□□□ -2.22
SCARNA3-201ENST00000517097 COL4A1P02462 1669 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 SDK1Q7Z5N4 2213 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 PDCD11Q14690 1871 aaKnown RBP1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 KIAA1551Q9HCM1 1747 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 ABCA4P78363 2273 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 CXorf51AA0A1B0GTR3 108 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 JMJD7-PLA2G4BH0Y9G9 81 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 INE1O15225 51 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 HCRTO43612 131 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 MRPS14O60783 128 aaKnown RBP1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 SNCGO76070 127 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 PPYP01298 95 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 SLC25A6P12236 298 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 SPRNQ5BIV9 151 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 C9orf153Q5TBE3 101 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 LYPD5Q6UWN5 251 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 LINC00299Q6ZSB3 139 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 C8orf59Q8N0T1 100 aaPredicted RBP1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 C10orf105Q8TEF2 133 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 PI4KAP42356 2102 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 ADGRB2O60241 1585 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 TTC37Q6PGP7 1564 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 SPAG17Q6Q759 2223 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 E9PCH4 1651 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 BAHCC1Q9P281 2608 aa1.16□□□□□ -2.22
SCARNA3-201ENST00000517097 PEAK1Q9H792 1746 aa1.15□□□□□ -2.22
SCARNA3-201ENST00000517097 MAP2P11137 1827 aaKnown RBP1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms