RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 ZFHX2Q9C0A1 2572 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TRPM7Q96QT4 1865 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NUMA1Q14980 2115 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CLIP1P30622 1438 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CPSF1Q10570 1443 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C10orf71Q711Q0 1435 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UACAQ9BZF9 1416 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TET3O43151 1660 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF142P52746 1687 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RP1P56715 2156 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CCDC88BA6NC98 1476 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 POLA1P09884 1462 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SUPT6HQ7KZ85 1726 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TNS1Q9HBL0 1735 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SPAG17Q6Q759 2223 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RTTNQ86VV8 2226 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MICAL3Q7RTP6 2002 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 EPRSP07814 1512 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PRDM15P57071 1507 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DISP1Q96F81 1524 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TRAV3A0A0B4J244 114 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 IGHV1-24A0A0C4DH33 117 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UBE2L5PA0A1B0GUS4 154 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MDFIC2A0A1B0GVS7 189 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 A0A1W2PRS3 328 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FAM24AA6NFZ4 105 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 HMSDA8MTL9 139 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF705FA8MVS1 300 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OOSP1A8MZH6 123 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 E7EUB6 86 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 M0R233 179 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 EDF1O60869 148 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PITX3O75364 302 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NDUFB6O95139 128 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 IGLV1-51P01701 117 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CRPP02741 224 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF22P17026 224 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ASIPP42127 132 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 POLR2JP52435 117 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UBA52P62987 128 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UBE2L3P68036 154 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DCDP81605 110 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q0VG73 95 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF345Q14585 488 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NNATQ16517 81 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PYY3Q5JQD4 70 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SPANXN1Q5VSR9 72 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C2orf82Q6UX34 121 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CASC2Q6XLA1 102 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q6ZQT0 140 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FP248Q71RG6 208 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LYPD6Q86Y78 171 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q8IYB0 196 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C4orf33Q8N1A6 199 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LINC00269Q8N2A0 174 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OR8B3Q8NGG8 313 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TMEM254Q8TBM7 123 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DYNLRB2Q8TF09 96 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF431Q8TF32 576 aaPredicted RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TSKUQ8WUA8 353 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PPDPFLQ8WWR9 84 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C20orf166-AS1Q96NR2 134 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OR8B2Q96RD0 313 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NABP2Q9BQ15 211 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SMIM7Q9BQ49 75 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q9BRP9 147 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 VAMP8Q9BV40 100 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CST11Q9H112 138 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ATG5Q9H1Y0 275 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CXCL16Q9H2A7 254 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MED9Q9NWA0 146 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TMEM242Q9NWH2 141 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NDUFB11Q9NX14 153 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FKBP11Q9NYL4 201 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LINC00312Q9Y6C7 94 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MPDZO75970 2070 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MYO18AQ92614 2054 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 HEATR5BQ9P2D3 2071 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PSME4Q14997 1843 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DOCK2Q92608 1830 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MYO3AQ8NEV4 1616 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MYH4Q9Y623 1939 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CLTCQ00610 1675 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TNRC6AQ8NDV7 1962 aaKnown RBP0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CASKIN1Q8WXD9 1431 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MON2Q7Z3U7 1717 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FANCAO15360 1455 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PTPRMP28827 1452 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ERVK-7P63135 1459 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 IFT140Q96RY7 1462 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NRXN1Q9ULB1 1477 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LAMB4A4D0S4 1761 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZGRF1Q86YA3 2104 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 HEATR1Q9H583 2144 aaKnown RBP0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SLIT2O94813 1529 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ABCC2Q92887 1545 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 KDM5DQ9BY66 1539 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PLXNA1Q9UIW2 1896 aa0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 THOC2Q8NI27 1593 aaKnown RBP0.55□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CFAP74Q9C0B2 1584 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms