RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TRBV19A0A075B6N1 114 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 TRAV1-2A0A0B4J238 106 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 CNIH1O95406 144 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 BLVRAP53004 296 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 FKBP1CQ5VVH2 108 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 COX7B2Q8TF08 81 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 DCUN1D1Q96GG9 259 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 DRC3Q9H069 523 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 RNASE7Q9H1E1 156 aaKnown RBP-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 UQCC1Q9NVA1 299 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 PLEKHJ1Q9NW61 149 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 COL4A6Q14031 1691 aa-3.15□□□□□ -2.91
SCARNA23-201ENST00000516060 IFT172Q9UG01 1749 aa-3.16□□□□□ -2.91
SCARNA23-201ENST00000516060 TROQ12816 1431 aaPredicted RBP-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 TRRAPQ9Y4A5 3859 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 FAM25EA8MYX2 175 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 H0YAA0 97 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 TFF1P04155 84 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 NFYBP25208 207 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 MT1XP80297 61 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 MRPS36P82909 103 aaKnown RBP-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 CLEC2BQ92478 149 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 ACACBO00763 2458 aa-3.16□□□□□ -2.92
SCARNA23-201ENST00000516060 TGIF2-C20orf24A0A0A6YYL0 155 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 TMEM210A6NLX4 147 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 EDF1O60869 148 aaKnown RBP-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 NCR2O95944 276 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 MSMO1Q15800 293 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 HIST3H3Q16695 136 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 Q5VV11 94 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 CYP2G1PQ6ZSU1 146 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 DIRC1Q969H9 104 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 RTL9Q8NET4 1388 aa-3.17□□□□□ -2.92
SCARNA23-201ENST00000516060 CXorf51AA0A1B0GTR3 108 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 H3BNG1 76 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 CHP2O43745 196 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 IFNA5P01569 189 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 INSL3P51460 131 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 PMS2P3Q13401 168 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 OR2T2Q6IF00 324 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 TRAPPC5Q8IUR0 188 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 IFT20Q8IY31 132 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 DEFB123Q8N688 67 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 OR8J2Q8NGG1 315 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 CMSS1Q9BQ75 279 aaKnown RBP-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 PBDC1Q9BVG4 233 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 ADAMTS12P58397 1594 aa-3.18□□□□□ -2.92
SCARNA23-201ENST00000516060 PTPRGP23470 1445 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 NSD3Q9BZ95 1437 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 ITPR2Q14571 2701 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 DNAH10Q8IVF4 4471 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 APOA1P02647 267 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 APOEP02649 317 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 MT-ND6P03923 174 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 COX5BP10606 129 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 POLR2JP52435 117 aaKnown RBP-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 GTF2A1P52655 376 aaPredicted RBP-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 C9orf62Q8N4C0 152 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 RABL2BQ9UNT1 228 aa-3.19□□□□□ -2.92
SCARNA23-201ENST00000516060 GOLGA4Q13439 2230 aaKnown RBP-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 M0QZ92 97 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 OCMP0CE72 109 aaPredicted RBP-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 OMPP47874 163 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 HADHBP55084 474 aaKnown RBP-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 HIST1H3AP68431 136 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 C20orf197Q8N268 126 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 BORCS7Q96B45 105 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 C8orf76Q96K31 380 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 TAF9BQ9HBM6 251 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 NPVFQ9HCQ7 196 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 PTPN23Q9H3S7 1636 aa-3.2□□□□□ -2.92
SCARNA23-201ENST00000516060 ARFGEF1Q9Y6D6 1849 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 ANKRD31Q8N7Z5 1873 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 TNNC2P02585 160 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 AKR1D1P51857 326 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 HBBP68871 147 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 OR8B8Q15620 311 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 PHF5AQ7RTV0 110 aaKnown RBP-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 WFDC6Q9BQY6 131 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 TRANK1O15050 2925 aa-3.21□□□□□ -2.92
SCARNA23-201ENST00000516060 NRXN2Q9P2S2 1712 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 FABP12A6NFH5 140 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 C5orf58C9J3I9 102 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 DCTN3O75935 186 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 IFNA7P01567 189 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 IFNA21P01568 189 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 CCDC172P0C7W6 258 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 CARD18P57730 90 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 OGFRL1Q5TC84 451 aaPredicted RBP-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 CFAP126Q5VTH2 177 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 OTUD6BQ8N6M0 293 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 GPATCH11Q8N954 259 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 SMIM7Q9BQ49 75 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 FGFR1OP2Q9NVK5 253 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 MED11Q9P086 117 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 NUBP2Q9Y5Y2 271 aa-3.22□□□□□ -2.92
SCARNA23-201ENST00000516060 PIK3C2GO75747 1445 aa-3.22□□□□□ -2.93
SCARNA23-201ENST00000516060 PARP14Q460N5 1801 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 SAA1P0DJI8 122 aaPredicted RBP-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 MT1HL1P0DM35 61 aa-3.23□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms