RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 SMUG1Q53HV7 270 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 SAPCD1Q5SSQ6 148 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 Q86TA4 180 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 COMMD7Q86VX2 200 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 LINC00479Q96M42 142 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 TXNDC17Q9BRA2 123 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 TCEAL7Q9BRU2 100 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 KRTAP1-5Q9BYS1 174 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 Q9H8V8 135 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 HHLA3Q9XRX5 114 aa10.22□□□□□ -0.77
HMGCLL1-209ENST00000515546 SRP19P09132 144 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-209ENST00000515546 SFTA3P0C7M3 94 aa10.21□□□□□ -0.77
HMGCLL1-209ENST00000515546 C6orf223Q8N319 242 aa10.21□□□□□ -0.77
HMGCLL1-209ENST00000515546 HIST1H2BAQ96A08 127 aa10.21□□□□□ -0.77
HMGCLL1-209ENST00000515546 DERL1Q9BUN8 251 aa10.21□□□□□ -0.77
HMGCLL1-209ENST00000515546 TRAV34A0A0B4J273 112 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 A0A1W2PPQ1 181 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 RAB19A4D1S5 217 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 PDE6DO43924 150 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 TTC32Q5I0X7 151 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
HMGCLL1-209ENST00000515546 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
HMGCLL1-209ENST00000515546 NDUFS6O75380 124 aaKnown RBP10.19□□□□□ -0.78
HMGCLL1-209ENST00000515546 AKR1C3P42330 323 aa10.19□□□□□ -0.78
HMGCLL1-209ENST00000515546 PTH2Q96A98 100 aa10.19□□□□□ -0.78
HMGCLL1-209ENST00000515546 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
HMGCLL1-209ENST00000515546 TMEM250H0YL14 139 aa10.18□□□□□ -0.78
HMGCLL1-209ENST00000515546 PEA15Q15121 130 aa10.18□□□□□ -0.78
HMGCLL1-209ENST00000515546 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-209ENST00000515546 OR4C5Q8NGB2 326 aa10.18□□□□□ -0.78
HMGCLL1-209ENST00000515546 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 K7EQD1 137 aa10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 ORM1P02763 201 aa10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 RNASE3P12724 160 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 BTF3P20290 206 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 ZNF876PQ49A33 203 aa10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 SMDT1Q9H4I9 107 aa10.17□□□□□ -0.78
HMGCLL1-209ENST00000515546 TRBV20OR9-2A0A075B6H5 130 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 C9JCJ5 164 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 RS1O15537 224 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 NXPH4O95158 308 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 GYPEP15421 78 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 CEBPGP53567 150 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 TNP2Q05952 138 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 LYPD5Q6UWN5 251 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 PARLQ9H300 379 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 ZFP30Q9Y2G7 519 aa10.16□□□□□ -0.78
HMGCLL1-209ENST00000515546 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 CIDEAO60543 219 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 LTAP01374 205 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 SRIP30626 198 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 CRIP1P50238 77 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 UBE2G1P62253 170 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 CFAP126Q5VTH2 177 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 UQCC3Q6UW78 93 aa10.15□□□□□ -0.78
HMGCLL1-209ENST00000515546 PGPEP1LA6NFU8 196 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 SIVA1O15304 175 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 IGLV2-8P01709 118 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 ZNF674Q2M3X9 581 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 CENPWQ5EE01 88 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 DNLZQ5SXM8 178 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 SLC7A5P1Q8MH63 180 aa10.14□□□□□ -0.79
HMGCLL1-209ENST00000515546 SH2D1AO60880 128 aa10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 S100A9P06702 114 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 ADCYAP1P18509 176 aa10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 ASIPP42127 132 aa10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 NHLRC2Q8NBF2 726 aa10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 IL36BQ9NZH7 164 aa10.13□□□□□ -0.79
HMGCLL1-209ENST00000515546 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 TRBV6-4A0A1B0GX49 114 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 B4DEV8 164 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 TIRAPP58753 221 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 SH2D6Q7Z4S9 175 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 ZNF575Q86XF7 245 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 SLC25A29Q8N8R3 303 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
HMGCLL1-209ENST00000515546 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 TMEM218A2RU14 115 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 ZNF727A8MUV8 499 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 GNG4P50150 75 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 LINC00315P59091 139 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 RHOHQ15669 191 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 LINC01559Q495D7 138 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 BAGE2Q86Y30 109 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 RYR1P21817 5038 aa10.11□□□□□ -0.79
HMGCLL1-209ENST00000515546 MGST1P10620 155 aaKnown RBP10.1□□□□□ -0.79
HMGCLL1-209ENST00000515546 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
HMGCLL1-209ENST00000515546 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms