RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 EPDR1Q9UM22 224 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 PRELID1Q9Y255 219 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 ICOSQ9Y6W8 199 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 RAB19A4D1S5 217 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 DIRC3C9JPN6 131 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 PAX4O43316 350 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 IFNA1P01562 189 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 IGLV2-8P01709 118 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 SLC25A5P05141 298 aaKnown RBP6.91□□□□□ -1.3
NEDD9-215ENST00000514660 CRYGDP07320 174 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 SRP19P09132 144 aaKnown RBP6.91□□□□□ -1.3
NEDD9-215ENST00000514660 MEF2BQ02080 365 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-215ENST00000514660 DAZ2Q13117 558 aaKnown RBP6.91□□□□□ -1.3
NEDD9-215ENST00000514660 SAMD13Q5VXD3 122 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 ARL6IP6Q8N6S5 226 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 C11orf72Q8NBR9 251 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 ZNF738Q8NE65 137 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
NEDD9-215ENST00000514660 LINC00479Q96M42 142 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 TXNDC17Q9BRA2 123 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
NEDD9-215ENST00000514660 EIF5A2Q9GZV4 153 aaKnown RBP6.91□□□□□ -1.3
NEDD9-215ENST00000514660 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 IGHV3-53P01767 116 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 TCRAP04437 139 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 TAGLN2P37802 199 aaKnown RBP6.9□□□□□ -1.3
NEDD9-215ENST00000514660 CDKN1BP46527 198 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 CRYBA4P53673 196 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 PEA15Q15121 130 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 LELP1Q5T871 98 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 C5orf17Q8NAS9 161 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 VGLL1Q99990 258 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
NEDD9-215ENST00000514660 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-215ENST00000514660 IGKV2-40A0A087WW87 121 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-215ENST00000514660 TRAV34A0A0B4J273 112 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 SNURFLB1AK76 121 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 PEX7O00628 323 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 LECT2O14960 151 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 PSCAO43653 123 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 NDUFS6O75380 124 aaKnown RBP6.89□□□□□ -1.31
NEDD9-215ENST00000514660 IGKV2D-40P01614 121 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-215ENST00000514660 IGLV2-11P01706 119 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 EVI2AP22794 236 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 CSN1S1P47710 185 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 ERCC8Q13216 396 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 FHL2Q14192 279 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 GOLT1AQ6ZVE7 132 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 COMMD7Q86VX2 200 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 SLC7A5P1Q8MH63 180 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 EIF4E3Q8N5X7 224 aaKnown RBP6.89□□□□□ -1.31
NEDD9-215ENST00000514660 CMTM2Q8TAZ6 248 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 HIST1H2BAQ96A08 127 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 C11orf52Q96A22 123 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 SGK494Q96LW2 274 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 C8orf49Q96NF6 230 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 AGPAT4-IT1Q9H0P7 198 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 Q9HAA7 133 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 RPH3ALQ9UNE2 315 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
NEDD9-215ENST00000514660 TRGV2A0A075B6R0 118 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 TRAV8-1A0A0A6YYK1 113 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 F6UZH7 168 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 RS1O15537 224 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 PDE6DO43924 150 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 CT45A10P0DMU9 189 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 NEGR1Q7Z3B1 354 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 DERL1Q9BUN8 251 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 SMDT1Q9H4I9 107 aa6.88□□□□□ -1.31
NEDD9-215ENST00000514660 TRGV1A0A0A0MS02 117 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 RBAKDNA6NC62 111 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 IBA57-AS1B1ANH7 110 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 J3KRW8 73 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 K7EP13 123 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 K7EQD1 137 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 RPL37AP61513 92 aaKnown RBP6.87□□□□□ -1.31
NEDD9-215ENST00000514660 MRPL23Q16540 153 aaKnown RBP6.87□□□□□ -1.31
NEDD9-215ENST00000514660 TMEM183BQ1AE95 376 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 CYB561D1Q8N8Q1 229 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 TVP23CQ96ET8 276 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 LINC00477Q96M19 166 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 TREM1Q9NP99 234 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 PSG8Q9UQ74 426 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 LPAP08519 4548 aa6.87□□□□□ -1.31
NEDD9-215ENST00000514660 TRAV12-3A0A0B4J271 114 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 SERTM2A0A1B0GWG4 89 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 SPINK4O60575 86 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 AKR1C3P42330 323 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 UQCC3Q6UW78 93 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 FAM19A4Q96LR4 140 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 C20orf144Q9BQM9 153 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
NEDD9-215ENST00000514660 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms