RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TRBV10-1A0A0K0K1A3 114 aa0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 CCKP06307 115 aa0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 PLGLB1Q02325 96 aa0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 CCDC153Q494R4 210 aa0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 TMEM244Q5VVB8 128 aa0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 TMEM91Q6ZNR0 172 aa0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 PTPRZ1P23471 2315 aaPredicted RBP0.44□□□□□ -2.34
HMGCS1-207ENST00000514610 OR2H2O95918 312 aa0.43□□□□□ -2.34
HMGCS1-207ENST00000514610 DNAJC15Q9Y5T4 150 aa0.43□□□□□ -2.34
HMGCS1-207ENST00000514610 KIAA0100Q14667 2235 aaKnown RBP0.43□□□□□ -2.34
HMGCS1-207ENST00000514610 ZFYVE26Q68DK2 2539 aa0.43□□□□□ -2.34
HMGCS1-207ENST00000514610 TTC28Q96AY4 2481 aa0.43□□□□□ -2.34
HMGCS1-207ENST00000514610 MYO7AQ13402 2215 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 SYNJ1O43426 1573 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 SMIM24O75264 130 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 SCTP09683 121 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 AKR1D1P51857 326 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 KLKP1Q107X0 134 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 SNX29P2Q8IUI4 249 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 TMEM14BQ9NUH8 114 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 TPRP12270 2363 aaKnown RBP0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 POLQO75417 2590 aa0.42□□□□□ -2.34
HMGCS1-207ENST00000514610 PARP14Q460N5 1801 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 HLA-DRB4P13762 266 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 DR1Q01658 176 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 SLC25A26Q70HW3 274 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 AKAP14Q86UN6 197 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 TAS2R8Q9NYW2 309 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 HLA-DRB4X5D2U9 266 aa0.41□□□□□ -2.34
HMGCS1-207ENST00000514610 CCDC171Q6TFL3 1326 aa0.4□□□□□ -2.34
HMGCS1-207ENST00000514610 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
HMGCS1-207ENST00000514610 CLLU1Q5K131 121 aa0.4□□□□□ -2.35
HMGCS1-207ENST00000514610 NOP16Q9Y3C1 178 aaKnown RBP0.4□□□□□ -2.35
HMGCS1-207ENST00000514610 PHIPQ8WWQ0 1821 aa0.39□□□□□ -2.35
HMGCS1-207ENST00000514610 ARFGEF1Q9Y6D6 1849 aa0.39□□□□□ -2.35
HMGCS1-207ENST00000514610 RBP4P02753 201 aa0.39□□□□□ -2.35
HMGCS1-207ENST00000514610 PPDPFLQ8WWR9 84 aa0.39□□□□□ -2.35
HMGCS1-207ENST00000514610 AIF1LQ9BQI0 150 aa0.39□□□□□ -2.35
HMGCS1-207ENST00000514610 ABCA12Q86UK0 2595 aa0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 CXorf51AA0A1B0GTR3 108 aa0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 MPC1LP0DKB6 136 aa0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 MAGOHBQ96A72 148 aaKnown RBP0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 TMEM141Q96I45 108 aa0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 DSCR8Q96T75 97 aa0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 AKAP11Q9UKA4 1901 aa0.38□□□□□ -2.35
HMGCS1-207ENST00000514610 MUC22E2RYF6 1773 aaPredicted RBP0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 PTPRMP28827 1452 aa0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 F8P00451 2351 aa0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 BORCS7-ASMTA0A0B4J1R7 106 aa0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 APOC1P02654 83 aa0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 LSM2Q9Y333 95 aaKnown RBP0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 KDM6BO15054 1643 aa0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
HMGCS1-207ENST00000514610 TEX49A0A1B0GTD5 131 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 DBIP07108 87 aaKnown RBP0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 PYYP10082 97 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 ATP6V0E2Q8NHE4 81 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 DYNLRB2Q8TF09 96 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 PYDC1Q8WXC3 89 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 SPANXA1Q9NS26 97 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 SPANXCQ9NY87 97 aa0.36□□□□□ -2.35
HMGCS1-207ENST00000514610 NRXN2Q9P2S2 1712 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 UHRF1BP1LA0JNW5 1464 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 ERCC6Q03468 1493 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 DOCK11Q5JSL3 2073 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 A0A096LNT2 108 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 TCRBV3S1A0A5B6 114 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 ZNF670-ZNF695F2Z2N8 137 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 SCGB1A1P11684 91 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 SLC25A6P12236 298 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 MORN2Q502X0 79 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 VPS25Q9BRG1 176 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 CADP27708 2225 aa0.35□□□□□ -2.35
HMGCS1-207ENST00000514610 J3QLW9 94 aa0.34□□□□□ -2.36
HMGCS1-207ENST00000514610 M0R129 80 aa0.34□□□□□ -2.36
HMGCS1-207ENST00000514610 CEP152O94986 1710 aa0.34□□□□□ -2.36
HMGCS1-207ENST00000514610 SPINK6Q6UWN8 80 aa0.34□□□□□ -2.36
HMGCS1-207ENST00000514610 COA4Q9NYJ1 87 aa0.34□□□□□ -2.36
HMGCS1-207ENST00000514610 FSIP2Q5CZC0 6907 aa0.34□□□□□ -2.36
HMGCS1-207ENST00000514610 TRAV2A0A0B4J234 112 aa0.33□□□□□ -2.36
HMGCS1-207ENST00000514610 YPEL1O60688 119 aa0.33□□□□□ -2.36
HMGCS1-207ENST00000514610 CYP2G1PQ6ZSU1 146 aa0.33□□□□□ -2.36
HMGCS1-207ENST00000514610 SPEF2Q9C093 1822 aa0.33□□□□□ -2.36
HMGCS1-207ENST00000514610 KMT2DO14686 5537 aa0.33□□□□□ -2.36
HMGCS1-207ENST00000514610 ANKRD17O75179 2603 aaKnown RBP0.33□□□□□ -2.36
HMGCS1-207ENST00000514610 ARHGEF10O15013 1369 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 TRAV12-2A0A075B6T6 113 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 ARPC5O15511 151 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 OR2T2Q6IF00 324 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 IFI27L1Q96BM0 104 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 BET1LQ9NYM9 111 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 GSKIPQ9P0R6 139 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 LAMB1P07942 1786 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
HMGCS1-207ENST00000514610 ELOF1P60002 83 aaKnown RBP0.31□□□□□ -2.36
HMGCS1-207ENST00000514610 NCS1P62166 190 aa0.31□□□□□ -2.36
HMGCS1-207ENST00000514610 HIST1H1AQ02539 215 aaPredicted RBP0.31□□□□□ -2.36
HMGCS1-207ENST00000514610 ATP11AUNQ6ZP68 121 aa0.31□□□□□ -2.36
HMGCS1-207ENST00000514610 SMIM3Q9BZL3 60 aa0.31□□□□□ -2.36
HMGCS1-207ENST00000514610 IGSF10Q6WRI0 2623 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms