RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 NDUFA6P56556 154 aa11.72□□□□□ -0.53
NUP54-214ENST00000514307 Q8N1Y9 231 aa11.72□□□□□ -0.53
NUP54-214ENST00000514307 MUC21A0A0G2JKD1 596 aa11.71□□□□□ -0.53
NUP54-214ENST00000514307 MUC21A0A140T8X8 626 aa11.71□□□□□ -0.53
NUP54-214ENST00000514307 RNASE3P12724 160 aaKnown RBP11.71□□□□□ -0.53
NUP54-214ENST00000514307 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.53
NUP54-214ENST00000514307 OR10AG1Q8NH19 301 aa11.71□□□□□ -0.53
NUP54-214ENST00000514307 SPXQ9BT56 116 aa11.71□□□□□ -0.53
NUP54-214ENST00000514307 TP53TG3Q9ULZ0 132 aa11.71□□□□□ -0.53
NUP54-214ENST00000514307 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.54
NUP54-214ENST00000514307 STAB1Q9NY15 2570 aa11.7□□□□□ -0.54
NUP54-214ENST00000514307 LOC102724200A0A096LPH7 203 aaPredicted RBP11.7□□□□□ -0.54
NUP54-214ENST00000514307 HTN1P15515 57 aa11.7□□□□□ -0.54
NUP54-214ENST00000514307 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 PPBPP02775 128 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 APOC4P55056 127 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 ZNF415Q09FC8 603 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 Q0VG73 95 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 SLAQ13239 276 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 KIAA1644Q3SXP7 199 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 KIR2DL5BQ8NHK3 375 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 PTH2Q96A98 100 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 C9orf85Q96MD7 179 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 MDFICQ9P1T7 246 aa11.69□□□□□ -0.54
NUP54-214ENST00000514307 M0R381 172 aa11.68□□□□□ -0.54
NUP54-214ENST00000514307 SMIM17P0DL12 118 aa11.68□□□□□ -0.54
NUP54-214ENST00000514307 C1orf158Q8N1D5 194 aa11.68□□□□□ -0.54
NUP54-214ENST00000514307 WFDC10AQ9H1F0 79 aa11.68□□□□□ -0.54
NUP54-214ENST00000514307 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
NUP54-214ENST00000514307 UBE2CO00762 179 aa11.67□□□□□ -0.54
NUP54-214ENST00000514307 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
NUP54-214ENST00000514307 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
NUP54-214ENST00000514307 SNRPEP62304 92 aaKnown RBP11.67□□□□□ -0.54
NUP54-214ENST00000514307 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
NUP54-214ENST00000514307 OXLD1Q5BKU9 147 aa11.67□□□□□ -0.54
NUP54-214ENST00000514307 PIK3CD-AS1Q5SR53 167 aa11.67□□□□□ -0.54
NUP54-214ENST00000514307 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
NUP54-214ENST00000514307 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
NUP54-214ENST00000514307 ALKBH7Q9BT30 221 aaPredicted RBP11.67□□□□□ -0.54
NUP54-214ENST00000514307 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 NXPH4O95158 308 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 RAB4AP20338 218 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 HOXA5P20719 270 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 SRIP30626 198 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 CKS2P33552 79 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 EGFEM1PQ0D2K5 195 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
NUP54-214ENST00000514307 AP1S3Q96PC3 154 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 RCHY1Q96PM5 261 aa11.66□□□□□ -0.54
NUP54-214ENST00000514307 M0R2P5 195 aa11.65□□□□□ -0.54
NUP54-214ENST00000514307 GIG44P09565 113 aaPredicted RBP11.65□□□□□ -0.54
NUP54-214ENST00000514307 EVI2AP22794 236 aa11.65□□□□□ -0.54
NUP54-214ENST00000514307 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
NUP54-214ENST00000514307 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
NUP54-214ENST00000514307 NDUFAF3Q9BU61 184 aa11.65□□□□□ -0.54
NUP54-214ENST00000514307 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
NUP54-214ENST00000514307 SMIM9A6NGZ8 99 aa11.64□□□□□ -0.55
NUP54-214ENST00000514307 MRPL51Q4U2R6 128 aaKnown RBP11.64□□□□□ -0.55
NUP54-214ENST00000514307 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
NUP54-214ENST00000514307 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
NUP54-214ENST00000514307 LAMTOR2Q9Y2Q5 125 aa11.64□□□□□ -0.55
NUP54-214ENST00000514307 U3KQK5 164 aa11.64□□□□□ -0.55
NUP54-214ENST00000514307 SORL1Q92673 2214 aa11.64□□□□□ -0.55
NUP54-214ENST00000514307 PPP1R17O96001 155 aa11.63□□□□□ -0.55
NUP54-214ENST00000514307 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
NUP54-214ENST00000514307 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
NUP54-214ENST00000514307 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
NUP54-214ENST00000514307 PRELID3AQ96N28 172 aa11.63□□□□□ -0.55
NUP54-214ENST00000514307 GSN-AS1Q9NRJ2 163 aa11.63□□□□□ -0.55
NUP54-214ENST00000514307 S100A2P29034 98 aa11.62□□□□□ -0.55
NUP54-214ENST00000514307 ZNF705AQ6ZN79 300 aaPredicted RBP11.62□□□□□ -0.55
NUP54-214ENST00000514307 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
NUP54-214ENST00000514307 C16orf74Q96GX8 76 aa11.62□□□□□ -0.55
NUP54-214ENST00000514307 A8MWV9 139 aa11.61□□□□□ -0.55
NUP54-214ENST00000514307 A8MZ25 164 aa11.61□□□□□ -0.55
NUP54-214ENST00000514307 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
NUP54-214ENST00000514307 TENM1Q9UKZ4 2725 aa11.61□□□□□ -0.55
NUP54-214ENST00000514307 D6R8Y8 96 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 SPRY2O43597 315 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 IGHV4-30-4P0DP06 118 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 AZU1P20160 251 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 C11orf72Q8NBR9 251 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 C18orf32Q8TCD1 76 aa11.6□□□□□ -0.55
NUP54-214ENST00000514307 LOC105371267A0A1B0GV96 52 aa11.59□□□□□ -0.55
NUP54-214ENST00000514307 F5H697 171 aa11.59□□□□□ -0.55
NUP54-214ENST00000514307 KRTAP10-11P60412 298 aa11.59□□□□□ -0.55
NUP54-214ENST00000514307 DAZ2Q13117 558 aaKnown RBP11.59□□□□□ -0.55
NUP54-214ENST00000514307 NIT1Q86X76 327 aa11.59□□□□□ -0.55
NUP54-214ENST00000514307 PRSS3P2Q8NHM4 247 aa11.59□□□□□ -0.55
NUP54-214ENST00000514307 RASL10AQ92737 203 aa11.59□□□□□ -0.55
NUP54-214ENST00000514307 MGPP08493 103 aa11.58□□□□□ -0.56
NUP54-214ENST00000514307 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
NUP54-214ENST00000514307 Q6ZWC4 215 aa11.58□□□□□ -0.56
NUP54-214ENST00000514307 POM121L12Q8N7R1 296 aa11.58□□□□□ -0.56
NUP54-214ENST00000514307 RNASE8Q8TDE3 154 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms