RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 A0A0G2JMM0 328 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 FAM25AB3EWG3 89 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 FAM25CB3EWG5 89 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 FAM25GB3EWG6 89 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 TPST1O60507 370 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 PDE6GP18545 87 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 MIC13Q5XKP0 118 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 RPL13AP3Q6NVV1 102 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 LYPD5Q6UWN5 251 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 DYNLRB2Q8TF09 96 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 PSMG3Q9BT73 122 aaPredicted RBP1.41□□□□□ -2.18
SGCB-203ENST00000514133 LINC00470Q9BZP3 86 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 IBTKQ9P2D0 1353 aaPredicted RBP1.41□□□□□ -2.18
SGCB-203ENST00000514133 NAV2Q8IVL1 2488 aa1.41□□□□□ -2.18
SGCB-203ENST00000514133 SPTBP11277 2137 aa1.4□□□□□ -2.18
SGCB-203ENST00000514133 PCNTO95613 3336 aa1.4□□□□□ -2.18
SGCB-203ENST00000514133 SETD2Q9BYW2 2564 aaPredicted RBP1.4□□□□□ -2.19
SGCB-203ENST00000514133 GRIN2AQ12879 1464 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 IGF2P01344 180 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 GYPBP06028 91 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 PYYP10082 97 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 GUCA1AP43080 201 aaPredicted RBP1.4□□□□□ -2.19
SGCB-203ENST00000514133 RPL37AP61513 92 aaKnown RBP1.4□□□□□ -2.19
SGCB-203ENST00000514133 SELENOWP63302 87 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 Q6ZUT4 128 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 TMEM191AQ9H0A3 160 aa1.4□□□□□ -2.19
SGCB-203ENST00000514133 MRPL36Q9P0J6 103 aaKnown RBP1.4□□□□□ -2.19
SGCB-203ENST00000514133 HELZ2Q9BYK8 2649 aaKnown RBP1.4□□□□□ -2.19
SGCB-203ENST00000514133 AFDNP55196 1824 aaKnown RBP1.4□□□□□ -2.19
SGCB-203ENST00000514133 TNRC18O15417 2968 aaPredicted RBP1.39□□□□□ -2.19
SGCB-203ENST00000514133 ANKRD11Q6UB99 2663 aaPredicted RBP1.39□□□□□ -2.19
SGCB-203ENST00000514133 DOPEY1Q5JWR5 2465 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 NUPR2A6NF83 97 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 NCR3O14931 201 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 IGHV3-30P01768 117 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 ANGP03950 147 aaKnown RBP1.39□□□□□ -2.19
SGCB-203ENST00000514133 IGHV3-30-5P0DP03 117 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 EMX2Q04743 252 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 C1orf54Q8WWF1 131 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 SDF2Q99470 211 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 C22orf24Q9Y442 160 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 CITO14578 2027 aa1.39□□□□□ -2.19
SGCB-203ENST00000514133 ADGRB1O14514 1584 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 TFF1P04155 84 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 FXYD4P59646 89 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 SCIMPQ6UWF3 145 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 SBSPONQ8IVN8 264 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 KCNRGQ8N5I3 272 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 VSTM2AQ8TAG5 236 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 PPDPFLQ8WWR9 84 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 DMAC1Q96GE9 116 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 AMELYQ99218 206 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 ATG5Q9H1Y0 275 aa1.38□□□□□ -2.19
SGCB-203ENST00000514133 DLEC1Q9Y238 1755 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 ASH1LQ9NR48 2969 aaKnown RBP1.37□□□□□ -2.19
SGCB-203ENST00000514133 TRAV2A0A0B4J234 112 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 A0A1B0GV90 55 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 CCDC167Q9P0B6 97 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 PIEZO1Q92508 2521 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 NALCNQ8IZF0 1738 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 NESP48681 1621 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 CC2D2AQ9P2K1 1620 aa1.37□□□□□ -2.19
SGCB-203ENST00000514133 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
SGCB-203ENST00000514133 RREB1Q92766 1687 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 FAM92AA1XBS5 289 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 PITX3O75364 302 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 PDCD10Q9BUL8 212 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 ASCC3Q8N3C0 2202 aaKnown RBP1.36□□□□□ -2.19
SGCB-203ENST00000514133 CDK12Q9NYV4 1490 aaPredicted RBP1.36□□□□□ -2.19
SGCB-203ENST00000514133 COL6A6A6NMZ7 2263 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 HECTD1Q9ULT8 2610 aa1.36□□□□□ -2.19
SGCB-203ENST00000514133 ROCK2O75116 1388 aaKnown RBP1.35□□□□□ -2.19
SGCB-203ENST00000514133 TMEM2Q9UHN6 1383 aa1.35□□□□□ -2.19
SGCB-203ENST00000514133 MYO18BQ8IUG5 2567 aa1.35□□□□□ -2.19
SGCB-203ENST00000514133 MUC22E2RYF6 1773 aaPredicted RBP1.35□□□□□ -2.19
SGCB-203ENST00000514133 SLC25A6P12236 298 aa1.35□□□□□ -2.19
SGCB-203ENST00000514133 EFNA4P52798 201 aa1.35□□□□□ -2.19
SGCB-203ENST00000514133 SPCS2Q15005 226 aa1.35□□□□□ -2.19
SGCB-203ENST00000514133 LINC01545Q5VT33 79 aa1.35□□□□□ -2.19
SGCB-203ENST00000514133 GCN1Q92616 2671 aaKnown RBP1.34□□□□□ -2.19
SGCB-203ENST00000514133 A0A0C4DFX4 3053 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 FLNBO75369 2602 aaKnown RBP1.34□□□□□ -2.19
SGCB-203ENST00000514133 TRBV10-1A0A0K0K1A3 114 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 HIGD1CA8MV81 97 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 IL5P05113 134 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 CCKP06307 115 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 Q6ZQY7 126 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 Q86TA4 180 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 DPH3Q96FX2 82 aa1.34□□□□□ -2.19
SGCB-203ENST00000514133 MRPL35Q9NZE8 188 aaKnown RBP1.34□□□□□ -2.19
SGCB-203ENST00000514133 OTOGLQ3ZCN5 2332 aa1.34□□□□□ -2.2
SGCB-203ENST00000514133 BDP1A6H8Y1 2624 aa1.34□□□□□ -2.2
SGCB-203ENST00000514133 ITPR3Q14573 2671 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 NCOA3Q9Y6Q9 1424 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 ZNF142P52746 1687 aaPredicted RBP1.33□□□□□ -2.2
SGCB-203ENST00000514133 BCORL1Q5H9F3 1711 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 CXorf51AA0A1B0GTR3 108 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 LOC101927531A0A1B0GV80 90 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms