RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CCL19Q99731 98 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 VPREB3Q9UKI3 123 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
SDHA-216ENST00000514027 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 TRAV8-2A0A0B4J237 113 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 SRD5A1P18405 259 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 PAX8Q06710 450 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
SDHA-216ENST00000514027 RBAKDNA6NC62 111 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
SDHA-216ENST00000514027 SRSF2Q01130 221 aaKnown RBP9.6□□□□□ -0.87
SDHA-216ENST00000514027 KLK9Q2XQG4 91 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 C16orf92Q96LL3 132 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 KLK9Q9UKQ9 250 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 HBDP02042 147 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 EVI2AP22794 236 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 SRSF1Q07955 248 aaKnown RBP eCLIP9.6□□□□□ -0.87
SDHA-216ENST00000514027 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
SDHA-216ENST00000514027 F8WDY8 70 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 RHODO00212 210 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 GAS8-AS1O95177 125 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
SDHA-216ENST00000514027 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 ATP5J2P56134 94 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 ANXA2RQ3ZCQ2 193 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
SDHA-216ENST00000514027 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
SDHA-216ENST00000514027 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
SDHA-216ENST00000514027 Q6ZQT7 251 aa9.58□□□□□ -0.88
SDHA-216ENST00000514027 H3BUX3 64 aa9.58□□□□□ -0.88
SDHA-216ENST00000514027 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
SDHA-216ENST00000514027 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
SDHA-216ENST00000514027 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
SDHA-216ENST00000514027 M0QXV9 152 aa9.57□□□□□ -0.88
SDHA-216ENST00000514027 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
SDHA-216ENST00000514027 TAL2Q16559 108 aa9.57□□□□□ -0.88
SDHA-216ENST00000514027 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
SDHA-216ENST00000514027 KIR2DL4Q99706 377 aa9.57□□□□□ -0.88
SDHA-216ENST00000514027 CNFNQ9BYD5 112 aa9.57□□□□□ -0.88
SDHA-216ENST00000514027 PKD1L2Q7Z442 2459 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
SDHA-216ENST00000514027 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 C10orf105Q8TEF2 133 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 PPDPFQ9H3Y8 114 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 U3KQE9 123 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 IGKV3-7A0A075B6H7 116 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 IGHV4-30-2A0A087WSY4 118 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 HLA-DRB4P13762 266 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 MRPL53Q96EL3 112 aaKnown RBP9.56□□□□□ -0.88
SDHA-216ENST00000514027 C20orf173Q96LM9 149 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 PSMG3-AS1Q96PY0 264 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 HLA-DRB4X5D2U9 266 aa9.56□□□□□ -0.88
SDHA-216ENST00000514027 HHLA3Q9XRX5 114 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 TRAV26-2A0A0B4J265 109 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 LEPP41159 167 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 DEFB1P60022 68 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 PRR9Q5T870 116 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 C9orf139Q6ZV77 190 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 PTH2Q96A98 100 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
SDHA-216ENST00000514027 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 H3BVH4 76 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 IGF1P05019 195 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 IFITM1P13164 125 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 CRIP2P52943 208 aaPredicted RBP9.54□□□□□ -0.88
SDHA-216ENST00000514027 BLCAPP62952 87 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 MORN3Q6PF18 240 aaPredicted RBP9.54□□□□□ -0.88
SDHA-216ENST00000514027 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 ZMAT4Q9H898 229 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 SPANXA1Q9NS26 97 aa9.54□□□□□ -0.88
SDHA-216ENST00000514027 CFAP46Q8IYW2 2715 aa9.53□□□□□ -0.88
SDHA-216ENST00000514027 NDUFA4O00483 81 aa9.53□□□□□ -0.88
SDHA-216ENST00000514027 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
SDHA-216ENST00000514027 Q6ZS46 218 aa9.53□□□□□ -0.88
SDHA-216ENST00000514027 TMEM158Q8WZ71 300 aa9.53□□□□□ -0.88
SDHA-216ENST00000514027 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
SDHA-216ENST00000514027 MSMBP08118 114 aa9.52□□□□□ -0.88
SDHA-216ENST00000514027 OR10J6PQ8NGY7 276 aa9.52□□□□□ -0.88
SDHA-216ENST00000514027 HIST1H4GQ99525 98 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms