RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TCL1BO95988 128 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 DEFB1P60022 68 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 MINOS1Q5TGZ0 78 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 MORN3Q6PF18 240 aaPredicted RBP7.41□□□□□ -1.22
VCAN-210ENST00000513960 MINOS1-NBL1R4GNA1 71 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 ZNF688P0C7X2 276 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
VCAN-210ENST00000513960 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 LINC00527Q9UJ94 153 aa7.41□□□□□ -1.22
VCAN-210ENST00000513960 CFAP126Q5VTH2 177 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 ZMAT4Q9H898 229 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.22
VCAN-210ENST00000513960 PAX8Q06710 450 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 CFAP161Q6P656 301 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 TEN1Q86WV5 123 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 CDIP1Q9H305 208 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 C11orf21Q9P2W6 132 aa7.4□□□□□ -1.22
VCAN-210ENST00000513960 MRPS12O15235 138 aaKnown RBP7.4□□□□□ -1.23
VCAN-210ENST00000513960 NPC2P61916 151 aa7.4□□□□□ -1.23
VCAN-210ENST00000513960 RNASE4P34096 147 aaKnown RBP7.39□□□□□ -1.23
VCAN-210ENST00000513960 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
VCAN-210ENST00000513960 GAGE5Q13069 117 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 GAGE6Q13070 117 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 TRPT1Q86TN4 253 aaKnown RBP7.39□□□□□ -1.23
VCAN-210ENST00000513960 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
VCAN-210ENST00000513960 METTL26Q96S19 204 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 PRO0461Q9UI25 63 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 TACC2O95359 2948 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 SLC25A20O43772 301 aa7.39□□□□□ -1.23
VCAN-210ENST00000513960 DUSP14O95147 198 aaKnown RBP7.39□□□□□ -1.23
VCAN-210ENST00000513960 ZFP36P26651 326 aaKnown RBP7.39□□□□□ -1.23
VCAN-210ENST00000513960 TP53TG1Q9Y2A0 90 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 LRBAP50851 2863 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 ASIPP42127 132 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 CTSGP08311 255 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
VCAN-210ENST00000513960 A0A087WWL8 130 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 IGF1P05019 195 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 PIFOQ8TCI5 191 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 FHL3Q13643 280 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 IGHV7-81A0A0B4J1V7 117 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 IGKV3-20P01619 116 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 LY6DQ14210 128 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 EBI3Q14213 229 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 Q8N6K4 173 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 NRACQ8N912 160 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 SLC50A1Q9BRV3 221 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 ZZEF1O43149 2961 aa7.37□□□□□ -1.23
VCAN-210ENST00000513960 ADARB2-AS1A8MUL3 147 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 SRD5A1P18405 259 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
VCAN-210ENST00000513960 OR10J6PQ8NGY7 276 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 CARD19Q96LW7 228 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 TRAV8-4A0A0B4J246 113 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 G3V318 75 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 UBE2E1P51965 193 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 NDUFA11Q86Y39 141 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 SIRPDQ9H106 197 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 F8W735 103 aaPredicted RBP7.36□□□□□ -1.23
VCAN-210ENST00000513960 Q6ZS46 218 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 Q8N9W7 124 aa7.36□□□□□ -1.23
VCAN-210ENST00000513960 HTN1P15515 57 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 F6UB75 175 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 SAA4P35542 130 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 SPTBN4Q9H254 2564 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 IGHV3OR16-10A0A075B7F0 116 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 A0A1W2PPR1 153 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 GNRH2O43555 120 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 RASL10AQ92737 203 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 HIVEP3Q5T1R4 2406 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 IGLV2-18A0A075B6J9 118 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 A4D1N5 150 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 FAM110DQ8TAY7 271 aaPredicted RBP7.35□□□□□ -1.23
VCAN-210ENST00000513960 BPESC1Q9GZL8 116 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 VCX2Q9H322 139 aa7.35□□□□□ -1.23
VCAN-210ENST00000513960 RELNP78509 3460 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 HERV-K104P63124 156 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 ZNF56Q15929 161 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 NEXN-AS1Q8NBZ9 246 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 GAGE12JA6NER3 117 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 CCDC179H3BU77 68 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 ATP6V0E1O15342 81 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 GAGE7O76087 117 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 IGHV3-11P01762 117 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 GAGE12FP0CL80 117 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 GAGE12GP0CL81 117 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 GAGE12IP0CL82 117 aa7.34□□□□□ -1.23
VCAN-210ENST00000513960 RPL13AP40429 203 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms