RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TVP23CQ96ET8 276 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 TRGV2A0A075B6R0 118 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 GAGE12BA1L429 117 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 GAGE12HA6NDE8 117 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 CIDEAO60543 219 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 LY6G6CO95867 125 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 LTAP01374 205 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 PIK3CD-AS1Q5SR53 167 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 RASL10AQ92737 203 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 C11orf52Q96A22 123 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 SMIM12Q96EX1 92 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 NAGKQ9UJ70 344 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 ALMS1Q8TCU4 4167 aa5.77□□□□□ -1.49
NEDD4-210ENST00000513957 TRGV1A0A0A0MS02 117 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 IGHV3-16A0A0C4DH30 117 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 FABP5P3A8MUU1 101 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 F5H768 121 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 M0R2P5 195 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 PDE6DO43924 150 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 GAGE7O76087 117 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 TYMSP04818 313 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 GAGE12FP0CL80 117 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 GAGE12GP0CL81 117 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 GAGE12IP0CL82 117 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 HTN3P15516 51 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 BLOC1S1P78537 153 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 RNF212Q495C1 297 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 MUC21Q5SSG8 566 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 FAM162BQ5T6X4 162 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 Q6ZTI0 123 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 TMEM183AQ8IXX5 376 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 PTH2Q96A98 100 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 SGK494Q96LW2 274 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 C8orf49Q96NF6 230 aa5.76□□□□□ -1.49
NEDD4-210ENST00000513957 NACAE9PAV3 2078 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 A0A1B0GVG6 124 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 NDUFS6O75380 124 aaKnown RBP5.75□□□□□ -1.49
NEDD4-210ENST00000513957 NPSP0C0P6 89 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 BCL2P10415 239 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 MEF2BQ02080 365 aaPredicted RBP5.75□□□□□ -1.49
NEDD4-210ENST00000513957 DNLZQ5SXM8 178 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 Q6ZQT7 251 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 LYPD6BQ8NI32 183 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 LINC00479Q96M42 142 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 MDFICQ9P1T7 246 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 GNG13Q9P2W3 67 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
NEDD4-210ENST00000513957 TRAV4A0A0B4J268 109 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 A0A1B0GV50 99 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 CXCL1P09341 107 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 ZNF80P51504 273 aaPredicted RBP5.74□□□□□ -1.49
NEDD4-210ENST00000513957 POM121L12Q8N7R1 296 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 MLST8Q9BVC4 326 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 BIN3Q9NQY0 253 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 IL36BQ9NZH7 164 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 PRO0255Q9UI72 69 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 VAX2Q9UIW0 290 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 RYR3Q15413 4870 aa5.74□□□□□ -1.49
NEDD4-210ENST00000513957 TRAV26-1A0A087WT03 109 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 XKRY2A2RUG3 117 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 S100A4P26447 101 aaKnown RBP5.73□□□□□ -1.49
NEDD4-210ENST00000513957 ASIPP42127 132 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 CCL20P78556 96 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 OR5I1Q13606 314 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 ALKAL2Q6UX46 152 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 BAGE2Q86Y30 109 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 ZC2HC1AQ96GY0 325 aa5.73□□□□□ -1.49
NEDD4-210ENST00000513957 MRPL16Q9NX20 251 aaKnown RBP5.73□□□□□ -1.49
NEDD4-210ENST00000513957 IGKV3D-20A0A0C4DH25 116 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 A0A1W2PPQ1 181 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 A8MWV9 139 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 B4DEV8 164 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 TMEM250H0YL14 139 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 VCYO14598 125 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 GNRH2O43555 120 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 SH2D1AO60880 128 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 ORM1P02763 201 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 RNASE3P12724 160 aaKnown RBP5.72□□□□□ -1.49
NEDD4-210ENST00000513957 HOXA5P20719 270 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 RPL35P42766 123 aaKnown RBP5.72□□□□□ -1.49
NEDD4-210ENST00000513957 CCL18P55774 89 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 ZNF876PQ49A33 203 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 UBE2DNLQ8IWF7 75 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 SYT8Q8NBV8 401 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 C11orf21Q9P2W6 132 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 RYR2Q92736 4967 aa5.72□□□□□ -1.49
NEDD4-210ENST00000513957 TRGV4A0A0C4DH28 118 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 KRBOX1C9JBD0 128 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 C9JCJ5 164 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 H0Y8G0 127 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 NUDT3O95989 172 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 GNG4P50150 75 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 CRIP1P50238 77 aa5.71□□□□□ -1.5
NEDD4-210ENST00000513957 NKX2-5P52952 324 aaPredicted RBP5.71□□□□□ -1.5
NEDD4-210ENST00000513957 CRYBA4P53673 196 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms