RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DEFB131BA0A096LNP1 70 aa8□□□□□ -1.13
HTT-213ENST00000513806 M0R2P5 195 aa8□□□□□ -1.13
HTT-213ENST00000513806 GATCO43716 136 aaKnown RBP8□□□□□ -1.13
HTT-213ENST00000513806 POM121L12Q8N7R1 296 aa8□□□□□ -1.13
HTT-213ENST00000513806 SPXQ9BT56 116 aa8□□□□□ -1.13
HTT-213ENST00000513806 RPP21Q9H633 154 aaKnown RBP8□□□□□ -1.13
HTT-213ENST00000513806 LY96Q9Y6Y9 160 aa8□□□□□ -1.13
HTT-213ENST00000513806 PLECQ15149 4684 aaKnown RBP7.99□□□□□ -1.13
HTT-213ENST00000513806 IGHV3-73A0A0B4J1V6 119 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 TMEM218A2RU14 115 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 F5H768 121 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 M0R381 172 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 HOXA5P20719 270 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 SLC7A5P1Q8MH63 180 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 OR10AG1Q8NH19 301 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 BIN3Q9NQY0 253 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 IL36BQ9NZH7 164 aa7.99□□□□□ -1.13
HTT-213ENST00000513806 TRAV10A0A0B4J240 114 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 F8W036 122 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 IGLC6P0CF74 106 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 DNLZQ5SXM8 178 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 UQCC3Q6UW78 93 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 GTSF1Q8WW33 167 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 SFRP2Q96HF1 295 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 SAMD10Q9BYL1 202 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 SCRT2Q9NQ03 307 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 PHLDA3Q9Y5J5 127 aa7.98□□□□□ -1.13
HTT-213ENST00000513806 A0A0J9YY99 117 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 TEX48A0A1B0GUV7 120 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 IGLL5B9A064 214 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 ATP5G1P05496 136 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 LGALS9BQ3B8N2 356 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
HTT-213ENST00000513806 LYZL1Q6UWQ5 148 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 FAM231DQ6ZW35 169 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 FER1L6-AS1Q8NA97 138 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 OR10G8Q8NGN5 311 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 RASL10AQ92737 203 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 OSTCQ9NRP0 149 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 MSRB1Q9NZV6 116 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 V9GYV3 84 aa7.97□□□□□ -1.13
HTT-213ENST00000513806 A0A087WWL8 130 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 SNAI2O43623 268 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 CXCL1P09341 107 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 RPS20P60866 119 aaKnown RBP7.96□□□□□ -1.14
HTT-213ENST00000513806 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 TMEM88Q6PEY1 159 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 PGLYRP4Q96LB8 373 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 ALMS1Q8TCU4 4167 aa7.96□□□□□ -1.14
HTT-213ENST00000513806 LYSTQ99698 3801 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 DNAH1Q9P2D7 4330 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 TRAV4A0A0B4J268 109 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 RS1O15537 224 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 MED14OSP0DP75 135 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 FHL2Q14192 279 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 RNF212Q495C1 297 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 Q6ZSN1 163 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 OR4C5Q8NGB2 326 aa7.95□□□□□ -1.14
HTT-213ENST00000513806 SSBP4Q9BWG4 385 aaPredicted RBP7.95□□□□□ -1.14
HTT-213ENST00000513806 IGHV4-4A0A075B6R2 117 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 TRAV26-1A0A087WT03 109 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 TRGV4A0A0C4DH28 118 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 NUPR2A6NF83 97 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 C3orf84H3BNL1 204 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 OR5AL1P0C617 328 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 FAM74A4Q5TZK3 123 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 SPANXN1Q5VSR9 72 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 ZFP82Q8N141 532 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 C15orf54Q8N8G6 183 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 SYT8Q8NBV8 401 aa7.94□□□□□ -1.14
HTT-213ENST00000513806 LOC100131303A0A0U1RQF7 123 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 XKRY2A2RUG3 117 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 A8MWL6 223 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 NXPH4O95158 308 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 CTRLP40313 264 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 FOXA3P55318 350 aaPredicted RBP7.93□□□□□ -1.14
HTT-213ENST00000513806 VSIG2Q96IQ7 327 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 C18orf15Q96N68 181 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 SEC11CQ9BY50 192 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 Q9UF83 564 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
HTT-213ENST00000513806 HIGD1CA8MV81 97 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 CRYGDP07320 174 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 NTF3P20783 257 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 CT83Q5H943 113 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 C10orf91Q5T1B1 145 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 UFSP1Q6NVU6 142 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 C14orf178Q8N769 122 aaPredicted RBP7.92□□□□□ -1.14
HTT-213ENST00000513806 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 TSKUQ8WUA8 353 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 PTH2Q96A98 100 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 APLNQ9ULZ1 77 aa7.92□□□□□ -1.14
HTT-213ENST00000513806 A0A096LPF7 62 aa7.91□□□□□ -1.14
HTT-213ENST00000513806 A0A1W2PPQ1 181 aa7.91□□□□□ -1.14
HTT-213ENST00000513806 A8MWV9 139 aa7.91□□□□□ -1.14
HTT-213ENST00000513806 NUDT3O95989 172 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms