RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 CD33P20138 364 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 AMTP48728 403 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 KIR3DS1Q14943 382 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 SPANXN1Q5VSR9 72 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 Q6ZWC4 215 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 POM121L12Q8N7R1 296 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 C11orf44Q8N8P7 122 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 SORL1Q92673 2214 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 IGHV1OR15-1A0A075B7D0 117 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 TRAV12-3A0A0B4J271 114 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 IGHV3-16A0A0C4DH30 117 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 J3KRW8 73 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 CRXO43186 299 aaPredicted RBP6.18□□□□□ -1.42
RNF4-220ENST00000513578 GNRH2O43555 120 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 S100A4P26447 101 aaKnown RBP6.18□□□□□ -1.42
RNF4-220ENST00000513578 CKS2P33552 79 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 KRTAP10-3P60369 221 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 MUC21Q5SSG8 566 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
RNF4-220ENST00000513578 PTH2Q96A98 100 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 MRAP2Q96G30 205 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 NAGKQ9UJ70 344 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 PKD1L1Q8TDX9 2849 aa6.18□□□□□ -1.42
RNF4-220ENST00000513578 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 MUC21A0A0G2JKD1 596 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 MUC21A0A140T8X8 626 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 RBMY1BA6NDE4 496 aaKnown RBP6.17□□□□□ -1.42
RNF4-220ENST00000513578 RBMY1EA6NEQ0 496 aaKnown RBP6.17□□□□□ -1.42
RNF4-220ENST00000513578 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 M0R2Z0 102 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 M0R381 172 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 RBMY1DP0C7P1 496 aaKnown RBP6.17□□□□□ -1.42
RNF4-220ENST00000513578 EVI2AP22794 236 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 SPINK13Q1W4C9 94 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 BEAN1Q3B7T3 259 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 PIK3CD-AS1Q5SR53 167 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 AP5S1Q9NUS5 200 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
RNF4-220ENST00000513578 NSD1Q96L73 2696 aaPredicted RBP6.16□□□□□ -1.42
RNF4-220ENST00000513578 IGHV1-24A0A0C4DH33 117 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 OR11H12B2RN74 326 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 WIPF1O43516 503 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 TNFRSF6BO95407 300 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 PPP1R17O96001 155 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 NPYP01303 97 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 CD7P09564 240 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 HIST2H2BDQ6DRA6 164 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 FA2HQ7L5A8 372 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 TRPT1Q86TN4 253 aaKnown RBP6.16□□□□□ -1.42
RNF4-220ENST00000513578 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 Q8N976 141 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 AP1S3Q96PC3 154 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 NXT2Q9NPJ8 142 aaKnown RBP6.16□□□□□ -1.42
RNF4-220ENST00000513578 WNK1Q9H4A3 2382 aa6.16□□□□□ -1.42
RNF4-220ENST00000513578 COL6A5A8TX70 2615 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 TRAV12-2A0A075B6T6 113 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 K7EMI3 77 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 SAP30O75446 220 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 SCGB1D1O95968 90 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 IGKV3-20P01619 116 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 C3orf79P0CE67 100 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 INSL3P51460 131 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 LINC00315P59091 139 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 NSUN5P1Q3KNT7 163 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 PRR31Q5SQ13 230 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 TEX43Q6ZNM6 134 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 Q8N1Y9 231 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 Q8N8P6 123 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 NRACQ8N912 160 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 C20orf78Q9BR46 151 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
RNF4-220ENST00000513578 IGLV2-18A0A075B6J9 118 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 LEPROTL1O95214 131 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 RBMY1A1P0DJD3 496 aaKnown RBP6.14□□□□□ -1.43
RNF4-220ENST00000513578 RBMY1CP0DJD4 496 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 BTF3P20290 206 aaKnown RBP6.14□□□□□ -1.43
RNF4-220ENST00000513578 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
RNF4-220ENST00000513578 SSTP61278 116 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 PKIAP61925 76 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 RPL32P62910 135 aaKnown RBP6.14□□□□□ -1.43
RNF4-220ENST00000513578 RBMY1FQ15415 496 aaKnown RBP6.14□□□□□ -1.43
RNF4-220ENST00000513578 SPATA12Q7Z6I5 190 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 CITED1Q99966 193 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 NDUFAF3Q9BU61 184 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 HSPB8Q9UJY1 196 aa6.14□□□□□ -1.43
RNF4-220ENST00000513578 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 NCR2O95944 276 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms