RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TMEM78Q5T7P6 136 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 ZNF492Q9P255 531 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 LEPP41159 167 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 PPT1P50897 306 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 NKX6-2Q9C056 277 aaPredicted RBP9.37□□□□□ -0.91
SPCS3-204ENST00000513139 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
SPCS3-204ENST00000513139 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 PEX7O00628 323 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 IGLV2-11P01706 119 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 CYB561D1Q8N8Q1 229 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 LYPD6BQ8NI32 183 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 MANBALQ9NQG1 85 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
SPCS3-204ENST00000513139 LRCOL1A6NCL2 159 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 SPINK4O60575 86 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
SPCS3-204ENST00000513139 CRYBA4P53673 196 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 IFITM2Q01629 132 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 PRR9Q5T870 116 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 Q6ZQT7 251 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 PSG8Q9UQ74 426 aa9.35□□□□□ -0.91
SPCS3-204ENST00000513139 LRP1Q07954 4544 aaKnown RBP9.34□□□□□ -0.91
SPCS3-204ENST00000513139 NMBP08949 121 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 BCL2P10415 239 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 CRISP2P16562 243 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 BTN1A1Q13410 526 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 PRNTQ86SH4 94 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 HIST1H2BAQ96A08 127 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 HHLA3Q9XRX5 114 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 DNAH8Q96JB1 4490 aa9.34□□□□□ -0.91
SPCS3-204ENST00000513139 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 KLLNB2CW77 178 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 F6UZH7 168 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 K7EQM0 130 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 PSCAO43653 123 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 IFNA1P01562 189 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 GPX1P07203 203 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 TCL1AP56279 114 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
SPCS3-204ENST00000513139 IBA57Q5T440 356 aaKnown RBP9.33□□□□□ -0.92
SPCS3-204ENST00000513139 EIF4E3Q8N5X7 224 aaKnown RBP9.33□□□□□ -0.92
SPCS3-204ENST00000513139 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
SPCS3-204ENST00000513139 C7orf71A4D174 169 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 OXTP01178 125 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 CRYGDP07320 174 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
SPCS3-204ENST00000513139 FHL2Q14192 279 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 Q6ZSA8 131 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 Q8N814 137 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 TREM1Q9NP99 234 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 VAX2Q9UIW0 290 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 KLF12Q9Y4X4 402 aa9.32□□□□□ -0.92
SPCS3-204ENST00000513139 TRBV7-9A0A0J9YWB2 115 aa9.31□□□□□ -0.92
SPCS3-204ENST00000513139 SRIP30626 198 aa9.31□□□□□ -0.92
SPCS3-204ENST00000513139 AKR1C3P42330 323 aa9.31□□□□□ -0.92
SPCS3-204ENST00000513139 TCEAL7Q9BRU2 100 aa9.31□□□□□ -0.92
SPCS3-204ENST00000513139 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
SPCS3-204ENST00000513139 K7EQD1 137 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
SPCS3-204ENST00000513139 TMEM183BQ1AE95 376 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 TOR2AQ5JU69 321 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 Q86TA4 180 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 FMC1Q96HJ9 113 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 DERL1Q9BUN8 251 aa9.3□□□□□ -0.92
SPCS3-204ENST00000513139 FBLL1A6NHQ2 334 aaKnown RBP9.29□□□□□ -0.92
SPCS3-204ENST00000513139 RPL35P42766 123 aaKnown RBP9.29□□□□□ -0.92
SPCS3-204ENST00000513139 UBE2G1P62253 170 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 NHLRC2Q8NBF2 726 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 TXNDC17Q9BRA2 123 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 NDFIP1Q9BT67 221 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 EIF5A2Q9GZV4 153 aaKnown RBP9.29□□□□□ -0.92
SPCS3-204ENST00000513139 MED9Q9NWA0 146 aa9.29□□□□□ -0.92
SPCS3-204ENST00000513139 RAB19A4D1S5 217 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 PDE6DO43924 150 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 GCGP01275 180 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 LTAP01374 205 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 ORM1P02763 201 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
SPCS3-204ENST00000513139 RAB14P61106 215 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms