RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 F8VRH5 84 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 LTAP01374 205 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 HLA-DMBP28068 263 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 LINC01545Q5VT33 79 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 A0A0J9YX75 114 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 NUPR2A6NF83 97 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 SPAG11BQ08648 103 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 ZNF524Q96C55 264 aa3.27□□□□□ -1.89
VCAN-209ENST00000513016 PRSS47A8MTI9 375 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.26□□□□□ -1.89
VCAN-209ENST00000513016 IGKV2-29A2NJV5 120 aaPredicted RBP3.26□□□□□ -1.89
VCAN-209ENST00000513016 NDUFS5O43920 106 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 LGALS9BQ3B8N2 356 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 TRBV20-1A0A075B6N2 111 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 TEX22C9J3V5 150 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 IFITM1P13164 125 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 ESM1Q9NQ30 184 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 IGKV1-17P01599 117 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 GPR179Q6PRD1 2367 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 LY6G6CO95867 125 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 CRYGDP07320 174 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 SPINK8P0C7L1 97 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 LYPD6Q86Y78 171 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 LINC01006Q8NI28 216 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 SMIM27A0A1W2PRY6 76 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 J3QQQ9 107 aa3.26□□□□□ -1.89
VCAN-209ENST00000513016 EGR2P11161 476 aaPredicted RBP3.26□□□□□ -1.89
VCAN-209ENST00000513016 FAM222AQ5U5X8 452 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 SIGMAR1Q99720 223 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 TSC2P49815 1807 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 DIDO1Q9BTC0 2240 aaKnown RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 TRAV26-2A0A0B4J265 109 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 DEFB4AO15263 64 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 NHLRC4P0CG21 123 aaPredicted RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 GAGE2AQ6NT46 116 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 LINC00322Q6ZN03 302 aaPredicted RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 DEFB105AQ8NG35 78 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 ARID1AO14497 2285 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 NLRC5Q86WI3 1866 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 H0YGX0 51 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 C3orf79P0CE67 100 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 EBI3Q14213 229 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 Q8N1Y9 231 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 C17orf77Q96MU5 243 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 SNRNP200O75643 2136 aaKnown RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 IGLV10-54A0A075B6I4 117 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 FGF23Q9GZV9 251 aaPredicted RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 CEP250Q9BV73 2442 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 FGF6P10767 208 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 Q6ZVH6 145 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HEATR1Q9H583 2144 aaKnown RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 USF3Q68DE3 2245 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 H7C423 109 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BKO60814 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 NPYP01303 97 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BJP06899 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BOP23527 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BBP33778 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BDP58876 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BCP62807 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST2H2BEQ16778 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BHQ93079 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BNQ99877 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 HIST1H2BMQ99879 126 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 LINC00574Q9H8X3 128 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 AKAP6Q13023 2319 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 PLXNA2O75051 1894 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 TRAV26-1A0A087WT03 109 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 Q9H8V8 135 aa3.25□□□□□ -1.89
VCAN-209ENST00000513016 GVINP1Q7Z2Y8 2422 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 TRBV6-1A0A0K0K1D8 114 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 K7EQG2 157 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 SIVA1O15304 175 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 TDRG1Q3Y452 100 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 NCOR1O75376 2440 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 GBF1Q92538 1859 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 GAGE12HA6NDE8 117 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 UBE2D1P51668 147 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 SRSF3P84103 164 aaKnown RBP3.24□□□□□ -1.89
VCAN-209ENST00000513016 UFSP1Q6NVU6 142 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 MYLKQ15746 1914 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 IGHV1-58A0A0C4DH39 117 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 hADV29S1A0JD25 119 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 GTSF1Q8WW33 167 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 GTSF1LQ9H1H1 148 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 ORMDL1Q9P0S3 153 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 TECTAO75443 2155 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 FSHBP01225 129 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 HAMPP81172 84 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 RITA1Q96K30 269 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 V9GYV3 84 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 C9JAW5 83 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 MPV17L2Q567V2 206 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
VCAN-209ENST00000513016 MRPL52Q86TS9 123 aaKnown RBP3.24□□□□□ -1.89
VCAN-209ENST00000513016 ZNF702PQ9H963 129 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms