RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PPDPFQ9H3Y8 114 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 NPVFQ9HCQ7 196 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 TMEM14CQ9P0S9 112 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 STRAPQ9Y3F4 350 aaKnown RBP5.41□□□□□ -1.54
CLCN3-208ENST00000512813 TRAV21A0A0B4J279 112 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 FNDC10F2Z333 226 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 SYNGR2O43760 224 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 PTTG1O95997 202 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 TBPP20226 339 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 HIGD2BQ4VC39 106 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 IZUMO2Q6UXV1 221 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 CROCCP3Q8IVE0 287 aa5.4□□□□□ -1.54
CLCN3-208ENST00000512813 TRAV6A0A075B6T7 132 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 A0A1W2PNN7 141 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 CD3DP04234 171 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 H2AFB1P0C5Y9 115 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 H2AFB2P0C5Z0 115 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 PTTG1IPP53801 180 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 RAB2AP61019 212 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 RRAS2P62070 204 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-208ENST00000512813 EIF5AP63241 154 aaKnown RBP5.39□□□□□ -1.55
CLCN3-208ENST00000512813 SCGB2B2Q4G0G5 96 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 PIK3CD-AS1Q5SR53 167 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 SSBP4Q9BWG4 385 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-208ENST00000512813 COMMD3Q9UBI1 195 aa5.39□□□□□ -1.55
CLCN3-208ENST00000512813 GVQW2A0A096LPI5 108 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-208ENST00000512813 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
CLCN3-208ENST00000512813 M0R2T5 61 aa5.38□□□□□ -1.55
CLCN3-208ENST00000512813 PYYP10082 97 aa5.38□□□□□ -1.55
CLCN3-208ENST00000512813 RPL36AP83881 106 aaKnown RBP5.38□□□□□ -1.55
CLCN3-208ENST00000512813 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
CLCN3-208ENST00000512813 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
CLCN3-208ENST00000512813 RPL36ALQ969Q0 106 aaKnown RBP5.38□□□□□ -1.55
CLCN3-208ENST00000512813 GPN1Q9HCN4 374 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-208ENST00000512813 TRBV7-3A0A075B6L6 115 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 TRBV10-1A0A0K0K1A3 114 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 RHODO00212 210 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 EIF3GO75821 320 aaKnown RBP eCLIP5.37□□□□□ -1.55
CLCN3-208ENST00000512813 RNASE3P12724 160 aaKnown RBP5.37□□□□□ -1.55
CLCN3-208ENST00000512813 ZNF674Q2M3X9 581 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
CLCN3-208ENST00000512813 SNX29P2Q8IUI4 249 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 C12orf45Q8N5I9 185 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-208ENST00000512813 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 TMED6Q8WW62 240 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 PFDN5Q99471 154 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 NAA50Q9GZZ1 169 aaKnown RBP5.37□□□□□ -1.55
CLCN3-208ENST00000512813 KCNIP3Q9Y2W7 256 aa5.37□□□□□ -1.55
CLCN3-208ENST00000512813 SLC25A6P12236 298 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 RAB5CP51148 216 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 OR1L4Q8NGR5 311 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 MGST2Q99735 147 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 JPT2Q9H910 190 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 MGAT4CQ9UBM8 478 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 GPR132Q9UNW8 380 aa5.36□□□□□ -1.55
CLCN3-208ENST00000512813 A0A087X002 238 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 LOC100506127A0A0U1RQW1 187 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 DUXBA0A1W2PPF3 345 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-208ENST00000512813 ATP5HO75947 161 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 S100A10P60903 97 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 GAGE6Q13070 117 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 LGALSLQ3ZCW2 172 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-208ENST00000512813 Q6ZRG5 221 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 OR10G8Q8NGN5 311 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 TYMSOSQ8TAI1 123 aa5.35□□□□□ -1.55
CLCN3-208ENST00000512813 CCDC59Q9P031 241 aaKnown RBP5.35□□□□□ -1.55
CLCN3-208ENST00000512813 A0A087WZ39 114 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 PIGBOS1A0A0B4J2F0 54 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 F6UZH7 168 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 CSN1S1P47710 185 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-208ENST00000512813 DIRAS2Q96HU8 199 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 CARD19Q96LW7 228 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 C11orf21Q9P2W6 132 aa5.34□□□□□ -1.55
CLCN3-208ENST00000512813 RAB3DO95716 219 aa5.33□□□□□ -1.56
CLCN3-208ENST00000512813 FAM74A4Q5TZK3 123 aa5.33□□□□□ -1.56
CLCN3-208ENST00000512813 NTM-AS1Q6ZSK4 140 aa5.33□□□□□ -1.56
CLCN3-208ENST00000512813 KRTAP11-1Q8IUC1 163 aa5.33□□□□□ -1.56
CLCN3-208ENST00000512813 C20orf203Q8NBC4 194 aa5.33□□□□□ -1.56
CLCN3-208ENST00000512813 PHLDA3Q9Y5J5 127 aa5.33□□□□□ -1.56
CLCN3-208ENST00000512813 SMIM31A0A1B0GVY4 71 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 GAGE12HA6NDE8 117 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 NBEAP1P0C6P0 100 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 CAMLGP49069 296 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 GAGE2BQ13066 116 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 MIC13Q5XKP0 118 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 TMEM14EPQ6UXP3 125 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 DYNC2LI1Q8TCX1 351 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 TSKUQ8WUA8 353 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 PHYHIPLQ96FC7 376 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 PSENENQ9NZ42 101 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 MTFP1Q9UDX5 166 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 NEBP20929 6669 aa5.32□□□□□ -1.56
CLCN3-208ENST00000512813 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
CLCN3-208ENST00000512813 TSHBP01222 138 aa5.31□□□□□ -1.56
CLCN3-208ENST00000512813 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
CLCN3-208ENST00000512813 ANXA3P12429 323 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms