RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ASB4Q9Y574 426 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 TIAM2Q8IVF5 1701 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 DOCK11Q5JSL3 2073 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 A0A0G2JMM0 328 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 ARL5CA6NH57 179 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 C9JAW5 83 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 CST7O76096 145 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 NDUFC2O95298 119 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 IGKCP01834 107 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 TRACP01848 142 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 TRGC2P03986 189 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 NMBP08949 121 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 IL7P13232 177 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 FABP4P15090 132 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 CAPZBP47756 277 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 LSM6P62312 80 aaKnown RBP-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 HBBP68871 147 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 KLKP1Q107X0 134 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 ITGB3BPQ13352 177 aaPredicted RBP-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 KRTAP19-5Q3LI72 72 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 TCTEX1D1Q8N7M0 179 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 TMEM229BQ8NBD8 167 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 PPP1R14BQ96C90 147 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 CFAP53Q96M91 514 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 CIB3Q96Q77 187 aaPredicted RBP-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 C9orf16Q9BUW7 83 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 SOGA1O94964 1423 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 ZFYVE9O95405 1425 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 UNC13BO14795 1591 aa-0.4□□□□□ -2.47
PDGFC-208ENST00000512711 TRAV5A0A0B4J249 113 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 LCE6AA0A183 80 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 TMEM30CPA0ZSE6 113 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 RIIAD1A6NNX1 92 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 G3V2T6 193 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 H7BYZ3 331 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 TPST1O60507 370 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 SERPINA1P01009 418 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 IGF2P01344 180 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 C1QBP02746 253 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 OGNP20774 298 aaKnown RBP-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 DEFB1P60022 68 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 GNG5P63218 68 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 MRPS36P82909 103 aaKnown RBP-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 SCGB2B2Q4G0G5 96 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 DEFB132Q7Z7B7 95 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 CROCCP2Q86T23 111 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 NEK7Q8TDX7 302 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 NAT14Q8WUY8 206 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 GPX7Q96SL4 187 aaPredicted RBP-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 PAIP2Q9BPZ3 127 aaKnown RBP-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 TET3O43151 1660 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 TSC2P49815 1807 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 FRMPD1Q5SYB0 1578 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 CDC42BPGQ6DT37 1551 aa-0.41□□□□□ -2.48
PDGFC-208ENST00000512711 UBR2Q8IWV8 1755 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 TMEM114B3SHH9 223 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 MCRIP1C9JLW8 97 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 AIPO00170 330 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 CDC42EP2O14613 210 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 DEFB4AO15263 64 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 APOA2P02652 100 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 BCL2P10415 239 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 PPP1R2P41236 205 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 RPL35P42766 123 aaKnown RBP-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 NDUFA6P56556 154 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 HSPE1P61604 102 aaKnown RBP-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 DEFB109BQ30KR1 87 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 Q5VV11 94 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 LYPD5Q6UWN5 251 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 IZUMO2Q6UXV1 221 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 WFDC9Q8NEX5 89 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 OR4B1Q8NGF8 309 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 OR8J3Q8NGG0 315 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 CLEC2BQ92478 149 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 PHB2Q99623 299 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 BPESC1Q9GZL8 116 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 COA4Q9NYJ1 87 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 PHLPP1O60346 1717 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 KNDC1Q76NI1 1749 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 FMN2Q9NZ56 1722 aa-0.42□□□□□ -2.48
PDGFC-208ENST00000512711 KIAA1549LQ6ZVL6 1849 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 RREB1Q92766 1687 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 CDK13Q14004 1512 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 ADCY9O60503 1353 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 CPDO75976 1380 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 TNS1Q9HBL0 1735 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 UHRF1BP1Q6BDS2 1440 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 FGD6Q6ZV73 1430 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 TMEM189A5PLL7 270 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 LYNX1G3V0Z9 82 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 H7C1C5 153 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 KPNA4O00629 521 aaPredicted RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 EDF1O60869 148 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 CCKP06307 115 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 DNAJB13P59910 316 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 RPS29P62273 56 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 LCN6P62502 163 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 RTL8BQ17RB0 113 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 FKBP1CQ5VVH2 108 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 C1orf140Q5VVS0 124 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms