RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 IGKV2D-40P01614 121 aaPredicted RBP7.66□□□□□ -1.18
RNF4-216ENST00000511859 GYPEP15421 78 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
RNF4-216ENST00000511859 GNG5P63218 68 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 CST9LP1Q5W188 147 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 SUN5Q8TC36 379 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 TM2D2Q9BX73 214 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 GGTLC3B5MD39 225 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 IFNA7P01567 189 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 ERCC8Q13216 396 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 SH2D6Q7Z4S9 175 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 Q9HAA7 133 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 OTORQ9NRC9 128 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 GNG13Q9P2W3 67 aa7.65□□□□□ -1.18
RNF4-216ENST00000511859 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
RNF4-216ENST00000511859 TEX46H3BTG2 121 aa7.64□□□□□ -1.19
RNF4-216ENST00000511859 TIRAPP58753 221 aa7.64□□□□□ -1.19
RNF4-216ENST00000511859 BLOC1S1P78537 153 aa7.64□□□□□ -1.19
RNF4-216ENST00000511859 CMTM2Q8TAZ6 248 aa7.64□□□□□ -1.19
RNF4-216ENST00000511859 MRPL16Q9NX20 251 aaKnown RBP7.64□□□□□ -1.19
RNF4-216ENST00000511859 PRELID1Q9Y255 219 aa7.64□□□□□ -1.19
RNF4-216ENST00000511859 TRAV1-1A0A0B4J248 108 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 KLLNB2CW77 178 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 C9JCJ5 164 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 IGLV2-8P01709 118 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 CSN1S1P47710 185 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 IFITM2Q01629 132 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 SGK494Q96LW2 274 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 LINC00477Q96M19 166 aa7.63□□□□□ -1.19
RNF4-216ENST00000511859 TRAV8-6A0A0B4J262 113 aa7.62□□□□□ -1.19
RNF4-216ENST00000511859 A0A1W2PRE2 83 aa7.62□□□□□ -1.19
RNF4-216ENST00000511859 DIRC3C9JPN6 131 aa7.62□□□□□ -1.19
RNF4-216ENST00000511859 RGS13O14921 159 aa7.62□□□□□ -1.19
RNF4-216ENST00000511859 RNASE4P34096 147 aaKnown RBP7.62□□□□□ -1.19
RNF4-216ENST00000511859 LAGE3Q14657 143 aa7.62□□□□□ -1.19
RNF4-216ENST00000511859 CIRBP-AS1Q8TBR5 109 aa7.62□□□□□ -1.19
RNF4-216ENST00000511859 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
RNF4-216ENST00000511859 TRAV8-1A0A0A6YYK1 113 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 GPX1P07203 203 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 NMBP08949 121 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 WFDC2Q14508 124 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 C5orf17Q8NAS9 161 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 Q8TAT8 98 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 ZNF479Q96JC4 524 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 FAM19A4Q96LR4 140 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 AGPAT4-IT1Q9H0P7 198 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 MANBALQ9NQG1 85 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 TP53TG3Q9ULZ0 132 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 EPDR1Q9UM22 224 aa7.61□□□□□ -1.19
RNF4-216ENST00000511859 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.6□□□□□ -1.19
RNF4-216ENST00000511859 IGHV1OR15-1A0A075B7D0 117 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 TRAV34A0A0B4J273 112 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 IFNA1P01562 189 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 TCRAP04437 139 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 SFTA3P0C7M3 94 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 PPT1P50897 306 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 TMEM78Q5T7P6 136 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 RASL10AQ92737 203 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 LINC00479Q96M42 142 aa7.6□□□□□ -1.19
RNF4-216ENST00000511859 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 RBFOX3A6NFN3 312 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 PEX7O00628 323 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 BCL2P10415 239 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 CRISP2P16562 243 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
RNF4-216ENST00000511859 LINC01620Q4KN68 170 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 C9orf47Q6ZRZ4 202 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 LYPD6BQ8NI32 183 aa7.59□□□□□ -1.19
RNF4-216ENST00000511859 TRAV8-3A0A0A6YYJ7 113 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 PFN1P07737 140 aaKnown RBP7.59□□□□□ -1.2
RNF4-216ENST00000511859 RAB14P61106 215 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 OR10J3Q5JRS4 329 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 TOR2AQ5JU69 321 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 Q8N976 141 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 DAZAP1Q96EP5 407 aaKnown RBP7.59□□□□□ -1.2
RNF4-216ENST00000511859 NKX6-2Q9C056 277 aaPredicted RBP7.59□□□□□ -1.2
RNF4-216ENST00000511859 ARL2-SNX15V9GYD0 113 aa7.59□□□□□ -1.2
RNF4-216ENST00000511859 RBAKDNA6NC62 111 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 K7EQM0 130 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 IGHV3-30P01768 117 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 IGHV3-33P01772 117 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 IGHV3-30-3P0DP02 117 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 IGHV3-30-5P0DP03 117 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 ASIPP42127 132 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 AKR1C3P42330 323 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 ZNF138P52744 262 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 MEF2BQ02080 365 aaPredicted RBP7.58□□□□□ -1.2
RNF4-216ENST00000511859 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
RNF4-216ENST00000511859 Q6ZRU5 148 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 NHLRC2Q8NBF2 726 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 SPXQ9BT56 116 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 EIF5A2Q9GZV4 153 aaKnown RBP7.58□□□□□ -1.2
RNF4-216ENST00000511859 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
RNF4-216ENST00000511859 VAX2Q9UIW0 290 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms