RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
COL6A6-203ENST00000511332 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
COL6A6-203ENST00000511332 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
COL6A6-203ENST00000511332 LYSTQ99698 3801 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 ZNF727A8MUV8 499 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 ARMS2P0C7Q2 107 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 HOXA5P20719 270 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 RPS20P60866 119 aaKnown RBP9.04□□□□□ -0.96
COL6A6-203ENST00000511332 RPL19P84098 196 aaKnown RBP9.04□□□□□ -0.96
COL6A6-203ENST00000511332 SLAQ13239 276 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 FAM74A3Q4VXF1 159 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 CLLU1Q5K131 121 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 OR4C5Q8NGB2 326 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 LINC00476Q8WZB0 136 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
COL6A6-203ENST00000511332 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 TRGV4A0A0C4DH28 118 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 H3BNG1 76 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 CIDEAO60543 219 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 ZFP82Q8N141 532 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 OR2D3Q8NGH3 330 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 OCC1Q8TAD7 63 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
COL6A6-203ENST00000511332 A8MWV9 139 aa9.02□□□□□ -0.97
COL6A6-203ENST00000511332 K7EN84 100 aa9.02□□□□□ -0.97
COL6A6-203ENST00000511332 SFTA3P0C7M3 94 aa9.02□□□□□ -0.97
COL6A6-203ENST00000511332 IFITM2Q01629 132 aa9.02□□□□□ -0.97
COL6A6-203ENST00000511332 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.97
COL6A6-203ENST00000511332 PRO0255Q9UI72 69 aa9.02□□□□□ -0.97
COL6A6-203ENST00000511332 DYNC2H1Q8NCM8 4307 aaKnown RBP9.02□□□□□ -0.97
COL6A6-203ENST00000511332 RS1O15537 224 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 SNAI2O43623 268 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 NUDT3O95989 172 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 OR5AL1P0C617 328 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 P0DMU3 169 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 SRSF3P84103 164 aaKnown RBP9.01□□□□□ -0.97
COL6A6-203ENST00000511332 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 ZNF479Q96JC4 524 aa9.01□□□□□ -0.97
COL6A6-203ENST00000511332 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
COL6A6-203ENST00000511332 A0A0J9YY99 117 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 M0R381 172 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 PAX4O43316 350 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 NXPH4O95158 308 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 LY6G6CO95867 125 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 FHL2Q14192 279 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 CFAP126Q5VTH2 177 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 FAM231DQ6ZW35 169 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 ZNF575Q86XF7 245 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 POM121L12Q8N7R1 296 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 NUDT11Q96G61 164 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 RNASE7Q9H1E1 156 aaKnown RBP9□□□□□ -0.97
COL6A6-203ENST00000511332 HHLA3Q9XRX5 114 aa9□□□□□ -0.97
COL6A6-203ENST00000511332 C9JQL5 133 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 RHODO00212 210 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 CRYBA4P53673 196 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 ERVFC1-1P60608 527 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 TMEM241Q24JQ0 296 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 SOHLH1Q5JUK2 328 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 ZFP2Q6ZN57 461 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 FER1L6-AS1Q8NA97 138 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-203ENST00000511332 NAT8Q9UHE5 227 aa8.99□□□□□ -0.97
COL6A6-203ENST00000511332 A0A1W2PPQ1 181 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 GATCO43716 136 aaKnown RBP8.98□□□□□ -0.97
COL6A6-203ENST00000511332 IGLC6P0CF74 106 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 CT83Q5H943 113 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 UBE2DNLQ8IWF7 75 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 TPPP3Q9BW30 176 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 ICOSQ9Y6W8 199 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
COL6A6-203ENST00000511332 F2Z2F3 143 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 GZMBP10144 247 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 GATA1P15976 413 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-203ENST00000511332 CTRLP40313 264 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 CACNG7P62955 275 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 ADIRFQ15847 76 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 C15orf54Q8N8G6 183 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 SFRP2Q96HF1 295 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
COL6A6-203ENST00000511332 PLECQ15149 4684 aaKnown RBP8.97□□□□□ -0.97
COL6A6-203ENST00000511332 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
COL6A6-203ENST00000511332 IGHV3-73A0A0B4J1V6 119 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 TRBV6-4A0A1B0GX49 114 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 A8MWL6 223 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 CCL18P55774 89 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 RPL23P62829 140 aaKnown RBP8.96□□□□□ -0.98
COL6A6-203ENST00000511332 RHOHQ15669 191 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 MRPL23Q16540 153 aaKnown RBP8.96□□□□□ -0.98
COL6A6-203ENST00000511332 RNF212Q495C1 297 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 FAM74A4Q5TZK3 123 aa8.96□□□□□ -0.98
COL6A6-203ENST00000511332 UQCC3Q6UW78 93 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms