RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 HILPDAQ9Y5L2 63 aa9.84□□□□□ -0.83
HMGB2-205ENST00000511316 PLXNB1O43157 2135 aa9.83□□□□□ -0.84
HMGB2-205ENST00000511316 A0A087WX48 190 aa9.83□□□□□ -0.84
HMGB2-205ENST00000511316 SCGB2A2Q13296 93 aa9.83□□□□□ -0.84
HMGB2-205ENST00000511316 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.83□□□□□ -0.84
HMGB2-205ENST00000511316 ZNF502Q8TBZ5 544 aa9.83□□□□□ -0.84
HMGB2-205ENST00000511316 TMEM158Q8WZ71 300 aa9.83□□□□□ -0.84
HMGB2-205ENST00000511316 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
HMGB2-205ENST00000511316 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 TRBV7-1A0A0A6YYK4 115 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 A0A1W2PRD5 423 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 A0A1W2PRF3 423 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 A0A1W2PRM7 423 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 DNAJC9-AS1A6NH13 148 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 NPFFO15130 113 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 BUB3O43684 328 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 SAA4P35542 130 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 DYNAPQ8N1N2 210 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
HMGB2-205ENST00000511316 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
HMGB2-205ENST00000511316 MED14OSP0DP75 135 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 ZNF80P51504 273 aaPredicted RBP9.82□□□□□ -0.84
HMGB2-205ENST00000511316 ZC2HC1BQ5TFG8 222 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 EEF1AKMT3Q96AZ1 226 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 METTL26Q96S19 204 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 SMAD5-AS1Q9Y6J3 95 aa9.82□□□□□ -0.84
HMGB2-205ENST00000511316 A6NJY4 79 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 E9PLD3 99 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 SMKR1H3BMG3 65 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 H7C1H1 209 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 IGHG4P01861 327 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 CLEC3BP05452 202 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 Q8TAT8 98 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 RAB37Q96AX2 223 aa9.81□□□□□ -0.84
HMGB2-205ENST00000511316 IGHV4-59P01825 116 aa9.8□□□□□ -0.84
HMGB2-205ENST00000511316 RNASE1P07998 156 aaKnown RBP9.8□□□□□ -0.84
HMGB2-205ENST00000511316 C18orf15Q96N68 181 aa9.8□□□□□ -0.84
HMGB2-205ENST00000511316 IGHV7-81A0A0B4J1V7 117 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 TRBV7-9A0A0J9YWB2 115 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 TMEM89A2RUT3 159 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 F8VRH5 84 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 M0R381 172 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 SAP30O75446 220 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 CIDEAO60543 219 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 SPANXN1Q5VSR9 72 aa9.79□□□□□ -0.84
HMGB2-205ENST00000511316 PHLDA1Q8WV24 401 aaPredicted RBP9.79□□□□□ -0.84
HMGB2-205ENST00000511316 A0A1B0GWB2 263 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 OR11H12B2RN74 326 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 FXYD2P54710 66 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 NDPQ00604 133 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 C15orf32Q32M92 178 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 NRACQ8N912 160 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 OR11H2Q8NH07 326 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 ZNF479Q96JC4 524 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 LINC00477Q96M19 166 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
HMGB2-205ENST00000511316 TMEM86BQ8N661 226 aa9.77□□□□□ -0.84
HMGB2-205ENST00000511316 Q8N9W7 124 aa9.77□□□□□ -0.84
HMGB2-205ENST00000511316 VCX2Q9H322 139 aa9.77□□□□□ -0.84
HMGB2-205ENST00000511316 NHP2Q9NX24 153 aaKnown RBP9.77□□□□□ -0.84
HMGB2-205ENST00000511316 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 IGLL5B9A064 214 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 RPL32P62910 135 aaKnown RBP9.77□□□□□ -0.85
HMGB2-205ENST00000511316 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
HMGB2-205ENST00000511316 SAMD13Q5VXD3 122 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 GTSCR1Q86UQ5 136 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 ZNF575Q86XF7 245 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
HMGB2-205ENST00000511316 MSRB1Q9NZV6 116 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 U3KQE9 123 aa9.77□□□□□ -0.85
HMGB2-205ENST00000511316 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
HMGB2-205ENST00000511316 FAM223BA6NKX1 122 aa9.76□□□□□ -0.85
HMGB2-205ENST00000511316 OVOL1O14753 267 aa9.76□□□□□ -0.85
HMGB2-205ENST00000511316 FAM223AQ8IWN6 122 aa9.76□□□□□ -0.85
HMGB2-205ENST00000511316 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
HMGB2-205ENST00000511316 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 MYMXA0A1B0GTQ4 84 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 FOXE3Q13461 319 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 CD300EQ496F6 205 aaPredicted RBP9.75□□□□□ -0.85
HMGB2-205ENST00000511316 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 DPH3P1Q9H4G8 78 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 S4R3C0 116 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 FXYD7P58549 80 aa9.75□□□□□ -0.85
HMGB2-205ENST00000511316 ERCC8Q13216 396 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms