RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 LOC100131303A0A0U1RQF7 123 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 MYMXA0A1B0GTQ4 84 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 TCRBV4S1A1TA0A5B7 111 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 CEBPZOSA8MTT3 80 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 FFAR1O14842 300 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 CKS2P33552 79 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 DYNLT3P51808 116 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 DSCR4P56555 118 aaPredicted RBP3.72□□□□□ -1.81
NUP54-210ENST00000510884 UBE2D3P61077 147 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 UBE2D2P62837 147 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 ZNF117Q03924 483 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 SPANXN4Q5MJ08 99 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 SLC25A29Q8N8R3 303 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 DCANP1Q8TF63 244 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 OCR1Q9BZK8 76 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 NHP2Q9NX24 153 aaKnown RBP3.72□□□□□ -1.81
NUP54-210ENST00000510884 ZNF492Q9P255 531 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 V9GY05 133 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 CFAP46Q8IYW2 2715 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 NLRC5Q86WI3 1866 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 TENM4Q6N022 2769 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 CHD9Q3L8U1 2897 aa3.72□□□□□ -1.81
NUP54-210ENST00000510884 NYNRINQ9P2P1 1898 aaKnown RBP3.71□□□□□ -1.82
NUP54-210ENST00000510884 MCM3APO60318 1980 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 TDRD6O60522 2096 aaKnown RBP3.71□□□□□ -1.82
NUP54-210ENST00000510884 IGHV1OR21-1A0A087WYE8 117 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 TRAV3A0A0B4J244 114 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 A8MUN3 132 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 COX7A2LO14548 114 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 SLC25A20O43772 301 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 PEBP1P30086 187 aaKnown RBP3.71□□□□□ -1.82
NUP54-210ENST00000510884 UBE2AP49459 152 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 KIAA0087Q14695 138 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 ZNF56Q15929 161 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 RSPO1Q2MKA7 263 aaPredicted RBP3.71□□□□□ -1.82
NUP54-210ENST00000510884 SLC48A1Q6P1K1 146 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 C7orf65Q6ZTY9 151 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.82
NUP54-210ENST00000510884 FXYD5Q96DB9 178 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 TAS2R4Q9NYW5 299 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 RELNP78509 3460 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 TICRRQ7Z2Z1 1910 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 SCN10AQ9Y5Y9 1956 aa3.71□□□□□ -1.82
NUP54-210ENST00000510884 TRIOO75962 3097 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 NBEAQ8NFP9 2946 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 IGLV1-36A0A0B4J1U3 117 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 A0A1B0GWA3 101 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 CRYM-AS1A6NIL9 109 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 COX7A2P2O60397 106 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 RBMY1CP0DJD4 496 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 ZNF823P16415 610 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 MFAP2P55001 183 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 LYZP61626 148 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 C11orf71Q6IPW1 123 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 ZFP2Q6ZN57 461 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 PGLYRP4Q96LB8 373 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 HIST1H4GQ99525 98 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 BCORQ6W2J9 1755 aa3.7□□□□□ -1.82
NUP54-210ENST00000510884 KALRNO60229 2985 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 FAM186AA6NE01 2351 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 COL4A6Q14031 1691 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 A0A0D9SEW6 157 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 A6NIN4 97 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 IBA57-AS1B1ANH7 110 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 C4orf51C9J302 202 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 C9JCJ5 164 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 TRBV12-3P01733 135 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 EFNA4P52798 201 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 FXYD2P54710 66 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 CCL20P78556 96 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 CLLU1OSQ5K130 101 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 GUSBP11Q6P575 273 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 MARCH3Q86UD3 253 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 Q8N8P6 123 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 RFESDQ8TAC1 157 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 DYNLRB2Q8TF09 96 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 C11orf52Q96A22 123 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 ZNF714Q96N38 554 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 CXCL16Q9H2A7 254 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 TIMM9Q9Y5J7 89 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 CPAMD8Q8IZJ3 1885 aa3.69□□□□□ -1.82
NUP54-210ENST00000510884 DLEC1Q9Y238 1755 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 PIEZO2Q9H5I5 2752 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 IGKV6D-21A0A0A0MT36 114 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 A0A1B0GW54 56 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 C19orf84I3L1E1 186 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 FSTL3O95633 263 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 IGLV3-27P01718 113 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 CCKP06307 115 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 LMO2P25791 158 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
NUP54-210ENST00000510884 ATXN8Q156A1 80 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 MLF2Q15773 248 aaPredicted RBP3.68□□□□□ -1.82
NUP54-210ENST00000510884 ATP5EP2Q5VTU8 51 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 LINC00596Q86U02 117 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 MDP1Q86V88 176 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 Q8N2B8 174 aa3.68□□□□□ -1.82
NUP54-210ENST00000510884 CD177Q8N6Q3 437 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms