RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 TRAV2A0A0B4J234 112 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 LINC01549A6NIU2 74 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 RNASE4P34096 147 aaKnown RBP9.62□□□□□ -0.87
LIN54-210ENST00000510877 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 ASH1LQ9NR48 2969 aaKnown RBP9.62□□□□□ -0.87
LIN54-210ENST00000510877 TRBV20-1A0A075B6N2 111 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 LINC00574Q9H8X3 128 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 ETDBQ3ZM63 59 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
LIN54-210ENST00000510877 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 C18orf65Q6ZTR6 163 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 BOD1L2Q8IYS8 172 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 TRGV1A0A0A0MS02 117 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 IGLC7A0M8Q6 106 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 B5MCH6 92 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 WT1-ASQ06250 92 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 A0A1W2PPM0 123 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 CCL18P55774 89 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 SCGB3A1Q96QR1 104 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 SS18L2Q9UHA2 77 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 WDR83OSQ9Y284 106 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 EXPH5Q8NEV8 1989 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
LIN54-210ENST00000510877 PSMB8P28062 276 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 BVES-AS1Q5T3Y7 98 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 KIR2DL4Q99706 377 aa9.61□□□□□ -0.87
LIN54-210ENST00000510877 NPIPB6E9PJ23 425 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 TNFRSF6BO95407 300 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 FRMD6-AS1P0C7T7 363 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
LIN54-210ENST00000510877 TOMM40O96008 361 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 NBEAP1P0C6P0 100 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 SLC25A39Q9BZJ4 359 aaPredicted RBP9.6□□□□□ -0.87
LIN54-210ENST00000510877 SPTBN5Q9NRC6 3674 aaKnown RBP9.6□□□□□ -0.87
LIN54-210ENST00000510877 CRXO43186 299 aaPredicted RBP9.6□□□□□ -0.87
LIN54-210ENST00000510877 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
LIN54-210ENST00000510877 CD7P09564 240 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 TMEM170BQ5T4T1 132 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 VGLL1Q99990 258 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 EPDR1Q9UM22 224 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 PHLDA3Q9Y5J5 127 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 FSHBP01225 129 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 RPP25LQ8N5L8 163 aaKnown RBP9.59□□□□□ -0.87
LIN54-210ENST00000510877 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 LAMA1P25391 3075 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 COL27A1Q8IZC6 1860 aaPredicted RBP9.59□□□□□ -0.87
LIN54-210ENST00000510877 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 TRGV9Q99603 122 aa9.59□□□□□ -0.87
LIN54-210ENST00000510877 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 LYPD6BQ8NI32 183 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 DEFB4AO15263 64 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 COX8AP10176 69 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 SIVA1O15304 175 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
LIN54-210ENST00000510877 K7EMT4 169 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 IGKV1-5P01602 117 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 TRBV12-3P01733 135 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 CRYBA4P53673 196 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 FAM74A4Q5TZK3 123 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 CHAC1Q9BUX1 264 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 ATMQ13315 3056 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 SPINK13Q1W4C9 94 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 CT83Q5H943 113 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 MLANAQ16655 118 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 GAGE2AQ6NT46 116 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 PLXNB1O43157 2135 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 TRAV26-1A0A087WT03 109 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 VSIRQ9H7M9 311 aa9.57□□□□□ -0.88
LIN54-210ENST00000510877 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
LIN54-210ENST00000510877 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
LIN54-210ENST00000510877 MEIG1Q5JSS6 88 aa9.56□□□□□ -0.88
LIN54-210ENST00000510877 PYGO2Q9BRQ0 406 aa9.56□□□□□ -0.88
LIN54-210ENST00000510877 PGPEP1Q9NXJ5 209 aa9.56□□□□□ -0.88
LIN54-210ENST00000510877 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 PLNP26678 52 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 UBE2L6O14933 153 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 ODF3L1Q8IXM7 274 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 PRADC1Q9BSG0 188 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 IGHV1-24A0A0C4DH33 117 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 PMS2P5A8MQ11 134 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 LYPD6Q86Y78 171 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 IGLV2-23P01705 113 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 TAL2Q16559 108 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 ORMDL2Q53FV1 153 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 SPXQ9BT56 116 aa9.55□□□□□ -0.88
LIN54-210ENST00000510877 SCRT1Q9BWW7 348 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms