RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 SRSF3P84103 164 aaKnown RBP7.28□□□□□ -1.24
USP53-207ENST00000510852 SLC25A42Q86VD7 318 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 DRAM1Q8N682 238 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 TMEM158Q8WZ71 300 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 CLEC7AQ9BXN2 247 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 ITPR3Q14573 2671 aa7.27□□□□□ -1.24
USP53-207ENST00000510852 ZANQ9Y493 2812 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 TRAV12-2A0A075B6T6 113 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 C9JQL5 133 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 H3BMG7 143 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 H3BRM9 83 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 ELOBQ15370 118 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 HCP5Q6MZN7 132 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 OR10AG1Q8NH19 301 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 RBMXL1Q96E39 390 aaKnown RBP7.27□□□□□ -1.25
USP53-207ENST00000510852 LST1O00453 97 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 IGLV1-47P01700 117 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 TRACP01848 142 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 RPL39P5Q59GN2 51 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 OR51H1Q8NH63 302 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 SCGB1C1Q8TD33 95 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 CHCHD10Q8WYQ3 142 aaPredicted RBP7.27□□□□□ -1.25
USP53-207ENST00000510852 C11orf21Q9P2W6 132 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
USP53-207ENST00000510852 WNK2Q9Y3S1 2297 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 A0A087WWC5 75 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 LOC389332A0A1B0GUA5 103 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 PROP1O75360 226 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 SAA2P0DJI9 122 aaPredicted RBP7.26□□□□□ -1.25
USP53-207ENST00000510852 MP68P56378 58 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 SEC11AP67812 179 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 C6orf99Q4VX62 202 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 OR10P1Q8NGE3 313 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 C7orf69Q9H7B7 122 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 CRYM-AS1A6NIL9 109 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 TRBV12-3P01733 135 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 IL5P05113 134 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 CXCL1P09341 107 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 SUPT4H1P63272 117 aaKnown RBP7.26□□□□□ -1.25
USP53-207ENST00000510852 EIF4EBP1Q13541 118 aaPredicted RBP7.26□□□□□ -1.25
USP53-207ENST00000510852 MORN5Q5VZ52 161 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 SHANK2-AS3Q9BTD1 123 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
USP53-207ENST00000510852 ANK3Q12955 4377 aaKnown RBP7.25□□□□□ -1.25
USP53-207ENST00000510852 MYO9AB2RTY4 2548 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 RBAKDNA6NC62 111 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 ODF3BA8MYP8 253 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 LINC00869P0C866 280 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 LINC00205P59089 165 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 NTN5Q8WTR8 489 aaPredicted RBP7.25□□□□□ -1.25
USP53-207ENST00000510852 CR1P17927 2039 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 IGHV1-58A0A0C4DH39 117 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 A0A0J9YXV3 536 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 BUB1B-PAK6H3BSN5 160 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 M0R378 163 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 IL3RAP26951 378 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 ZNF137PP52743 207 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 RPL30P62888 115 aaKnown RBP7.25□□□□□ -1.25
USP53-207ENST00000510852 MPV17L2Q567V2 206 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 MUC21Q5SSG8 566 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 ZNF833PQ6ZTB9 187 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 PARLQ9H300 379 aa7.25□□□□□ -1.25
USP53-207ENST00000510852 CELSR1Q9NYQ6 3014 aa7.24□□□□□ -1.25
USP53-207ENST00000510852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP53-207ENST00000510852 ZNF73O43830 326 aaPredicted RBP7.24□□□□□ -1.25
USP53-207ENST00000510852 FLNAP21333 2647 aaKnown RBP7.24□□□□□ -1.25
USP53-207ENST00000510852 LINC00313P59037 77 aa7.24□□□□□ -1.25
USP53-207ENST00000510852 Q6ZSV7 163 aa7.24□□□□□ -1.25
USP53-207ENST00000510852 PRELID3AQ96N28 172 aa7.24□□□□□ -1.25
USP53-207ENST00000510852 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
USP53-207ENST00000510852 EIF5A2Q9GZV4 153 aaKnown RBP7.24□□□□□ -1.25
USP53-207ENST00000510852 F11RQ9Y624 299 aaKnown RBP7.24□□□□□ -1.25
USP53-207ENST00000510852 IGHV3OR16-10A0A075B7F0 116 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 LINC00473A8K010 186 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 SNRPGP15A8MWD9 76 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 TRAV40A0A0B4J280 105 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 UPK2O00526 184 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 CREBL2O60519 120 aaPredicted RBP7.23□□□□□ -1.25
USP53-207ENST00000510852 PSMB2P49721 201 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 AQP10Q96PS8 301 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 SLC35B3Q9H1N7 401 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 DPM3Q9P2X0 92 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 ABCA1O95477 2261 aa7.23□□□□□ -1.25
USP53-207ENST00000510852 IGHV1-69DA0A0B4J2H0 117 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 E9PLD3 99 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 IGHV1-69P01742 117 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 IGHV4-38-2P0DP08 117 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 MINOS1Q5TGZ0 78 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 MINOS1-NBL1R4GNA1 71 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 TEX15Q9BXT5 2789 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 CSPG4Q6UVK1 2322 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 IGLV9-49A0A0B4J1Y8 123 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 SYNGR2O43760 224 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 LGALS9BQ3B8N2 356 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 RUSC1-AS1Q66K80 236 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms