RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 RPL18Q07020 188 aaKnown RBP2.3□□□□□ -2.04
NUP54-209ENST00000510569 FUT5Q11128 374 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 MRPL51Q4U2R6 128 aaKnown RBP2.3□□□□□ -2.04
NUP54-209ENST00000510569 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 MIR17HGQ75NE6 70 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 CLECL1Q8IZS7 167 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 HIST3H2BBQ8N257 126 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 TMEM256Q8N2U0 113 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 UBALD1Q8TB05 177 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 PSMF1Q92530 271 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 DIRC1Q969H9 104 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 RPP21Q9H633 154 aaKnown RBP2.3□□□□□ -2.04
NUP54-209ENST00000510569 BCL2L10Q9HD36 194 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 TMEM106BQ9NUM4 274 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 BET1LQ9NYM9 111 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 EPDR1Q9UM22 224 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 LINC00588Q9Y4M8 146 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 PHLDA3Q9Y5J5 127 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 LINC00312Q9Y6C7 94 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 TET2Q6N021 2002 aaPredicted RBP2.3□□□□□ -2.04
NUP54-209ENST00000510569 MYO7AQ13402 2215 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 C5orf42Q9H799 3197 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 GOLGA4Q13439 2230 aaKnown RBP2.29□□□□□ -2.04
NUP54-209ENST00000510569 MPDZO75970 2070 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 TRPM6Q9BX84 2022 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 IGHV3-49A0A0A0MS15 119 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 TRGV5A0A0B4J1U4 118 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 IGHV3-21A0A0B4J1V1 117 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 C10orf142B7Z368 130 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 MCRIP1C9JLW8 97 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 C3orf84H3BNL1 204 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 K7ERS5 55 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 M0R129 80 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 HMGN4O00479 90 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 LEPROTO15243 131 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 APCSP02743 223 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 IGKV1-16P04430 117 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 IFI6P09912 130 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 IGHV1-8P0DP01 117 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 UBE2AP49459 152 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 CMC4P56277 68 aaPredicted RBP2.29□□□□□ -2.04
NUP54-209ENST00000510569 Q0VG73 95 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 COMMD6Q7Z4G1 85 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 SPATA12Q7Z6I5 190 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 AMN1Q8IY45 258 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 LINC00471Q8N535 108 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 ITLN2Q8WWU7 325 aaPredicted RBP2.29□□□□□ -2.04
NUP54-209ENST00000510569 RBMXL1Q96E39 390 aaKnown RBP2.29□□□□□ -2.04
NUP54-209ENST00000510569 COX14Q96I36 57 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 S100A13Q99584 98 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 WFDC6Q9BQY6 131 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 NPCDR1Q9BY65 106 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 REG4Q9BYZ8 158 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 ATG5Q9H1Y0 275 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 C11orf1Q9H5F2 150 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 OSTCQ9NRP0 149 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 HEATR5AQ86XA9 2040 aa2.29□□□□□ -2.04
NUP54-209ENST00000510569 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.28□□□□□ -2.04
NUP54-209ENST00000510569 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 GNGT2O14610 69 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 IGHV3-7P01780 117 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 HLA-DQA1P01909 254 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 GYPBP06028 91 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 IGHV3-30-3P0DP02 117 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 HLA-DMBP28068 263 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 FXYD6P3P58550 94 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 TSPEAR-AS2P59090 65 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 PEA15Q15121 130 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 ZNF705AQ6ZN79 300 aaPredicted RBP2.28□□□□□ -2.04
NUP54-209ENST00000510569 Q8N2B8 174 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 SIGLECL1Q8N7X8 197 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 ZNF714Q96N38 554 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 SCGB3A1Q96QR1 104 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 UPK3BQ9BT76 320 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 DSCAML1Q8TD84 2053 aa2.28□□□□□ -2.04
NUP54-209ENST00000510569 TRIOO75962 3097 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 TTC28Q96AY4 2481 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 CPAMD8Q8IZJ3 1885 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 OOSP1A8MZH6 123 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 TRACP01848 142 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 CISD3P0C7P0 127 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 CGB3P0DN86 165 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 CGB7P0DN87 165 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 CCL3P10147 92 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 CD28P10747 220 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 SMIM11AP58511 58 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 NPC2P61916 151 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 MRPS36P82909 103 aaKnown RBP2.27□□□□□ -2.05
NUP54-209ENST00000510569 FAM78AQ5JUQ0 283 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 OR2T2Q6IF00 324 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 Q6ZS92 163 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 PCP2Q8IVA1 136 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 POLEQ07864 2286 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 F5P12259 2224 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 ALPK2Q86TB3 2170 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms