RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 ZNF506Q5JVG8 444 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 CFAP126Q5VTH2 177 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 FRZBQ92765 325 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 AQP10Q96PS8 301 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 EPDR1Q9UM22 224 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 TRAV34A0A0B4J273 112 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 GGTLC3B5MD39 225 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 RS1O15537 224 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 PTTG1O95997 202 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 GCSHP23434 173 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 SAPCD1Q5SSQ6 148 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 ATP6V0E2Q8NHE4 81 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
SCARB2-204ENST00000509994 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
SCARB2-204ENST00000509994 PGPEP1LA6NFU8 196 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 CIDEAO60543 219 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 MGST1P10620 155 aaKnown RBP6.84□□□□□ -1.31
SCARB2-204ENST00000509994 ASIPP42127 132 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 AKR1C8PQ5T2L2 129 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 DPPA3Q6W0C5 159 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 BATF3Q9NR55 127 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 TNFSF18Q9UNG2 199 aa6.84□□□□□ -1.31
SCARB2-204ENST00000509994 TRBV6-4A0A1B0GX49 114 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GAGE12JA6NER3 117 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 B4DEV8 164 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GIPP09681 153 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-204ENST00000509994 FGF8P55075 233 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-204ENST00000509994 TIRAPP58753 221 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 UBE2G1P62253 170 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 HAMPP81172 84 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GAGE1Q13065 139 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GAGE4Q13068 117 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GAGE5Q13069 117 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GAGE13Q4V321 117 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 LELP1Q5T871 98 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 Q5VSD8 79 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 RPL7L1Q6DKI1 246 aaKnown RBP6.83□□□□□ -1.32
SCARB2-204ENST00000509994 LINC00479Q96M42 142 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 GTSF1LQ9H1H1 148 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 ARL2-SNX15V9GYD0 113 aa6.83□□□□□ -1.32
SCARB2-204ENST00000509994 CTXND1A0A1B0GTU2 59 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 A0A1W2PRE2 83 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 FABP5P3A8MUU1 101 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 A8MWV9 139 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 H3BVH4 76 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 M0R036 132 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 PEX7O00628 323 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 IGLV2-11P01706 119 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-204ENST00000509994 INAFM2P0DMQ5 153 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-204ENST00000509994 FAM74A4Q5TZK3 123 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 Q86TA4 180 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 OR2T35Q8NGX2 323 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 URGCP-MRPS24S4R325 110 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 DNAH5Q8TE73 4624 aa6.82□□□□□ -1.32
SCARB2-204ENST00000509994 IBA57-AS1B1ANH7 110 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 RNASE3P12724 160 aaKnown RBP6.81□□□□□ -1.32
SCARB2-204ENST00000509994 XGP55808 180 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 Q5BKY6 102 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 OR11H4Q8NGC9 324 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 SUN5Q8TC36 379 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
SCARB2-204ENST00000509994 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 PARLQ9H300 379 aa6.81□□□□□ -1.32
SCARB2-204ENST00000509994 TMSB15BA0A087X1C1 80 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 GRIFINA4D1Z8 144 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 MAP1LC3B2A6NCE7 125 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 Q8N814 137 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 STOML3Q8TAV4 291 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 NKX6-2Q9C056 277 aaPredicted RBP6.8□□□□□ -1.32
SCARB2-204ENST00000509994 MAP1LC3BQ9GZQ8 125 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
SCARB2-204ENST00000509994 IGKV3D-20A0A0C4DH25 116 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 RNF222A6NCQ9 220 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 FAM74A7A6NL05 159 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 M0R381 172 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 RHODO00212 210 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 LECT2O14960 151 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 ARPC5O15511 151 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 TPT1P13693 172 aaKnown RBP6.79□□□□□ -1.32
SCARB2-204ENST00000509994 ZNF726P1Q15940 193 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 TOR2AQ5JU69 321 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 FAM162BQ5T6X4 162 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 KCNIP4Q6PIL6 250 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 ZFP2Q6ZN57 461 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 Q6ZSN1 163 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 Q8N3U1 123 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 HIST1H2BAQ96A08 127 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 PTH2Q96A98 100 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 FMC1Q96HJ9 113 aa6.79□□□□□ -1.32
SCARB2-204ENST00000509994 JPT2Q9H910 190 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms